RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ZNF470Q6ECI4 717 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 CXorf57Q6NSI4 855 aaKnown RBP11.88□□□□□ -0.51
SMAD3-202ENST00000439724 Q6ZNB5 142 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 FAM217AQ8IXS0 508 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 OR13J1Q8NGT2 312 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 OR6Y1Q8NGX8 325 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 PPP1R14CQ8TAE6 165 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 RDH11Q8TC12 318 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 IFT43Q96FT9 208 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 TRIB3Q96RU7 358 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 SIKE1Q9BRV8 207 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 SPON2Q9BUD6 331 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 CINPQ9BW66 212 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-202ENST00000439724 C1QTNF1Q9BXJ1 281 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 SLC40A1Q9NP59 571 aa11.88□□□□□ -0.51
SMAD3-202ENST00000439724 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-202ENST00000439724 TTC24A2A3L6 582 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-202ENST00000439724 LDB2O43679 373 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 GREM1O60565 184 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 RASSF9O75901 435 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 NDST3O95803 873 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 ATP5BP06576 529 aaKnown RBP11.87□□□□□ -0.51
SMAD3-202ENST00000439724 CNPP09543 421 aaKnown RBP11.87□□□□□ -0.51
SMAD3-202ENST00000439724 SLC35E2BP0CK96 405 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 MYL2P10916 166 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 KCNA4P22459 653 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 CES1P23141 567 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 GMPRP36959 345 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 RAB10P61026 200 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 SLC12A1Q13621 1099 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 RNF219Q5W0B1 726 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-202ENST00000439724 FAM91A1Q658Y4 838 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 ZCCHC23Q6ZST2 131 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 OTOP2Q7RTS6 562 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 C10orf107Q8IVU9 208 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 ARID3BQ8IVW6 561 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-202ENST00000439724 FIBCD1Q8N539 461 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 HJURPQ8NCD3 748 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-202ENST00000439724 ADAMTS19Q8TE59 1207 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 SKA1Q96BD8 255 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 TSNARE1Q96NA8 513 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 SLC22A12Q96S37 553 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 MFSD1Q9H3U5 465 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 TRPC7Q9HCX4 862 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 SAR1AQ9NR31 198 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 ZNF358Q9NW07 568 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 SMPD4Q9NXE4 827 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 ZFP69BQ9UJL9 534 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 TLK1Q9UKI8 766 aa11.87□□□□□ -0.51
SMAD3-202ENST00000439724 CEP350Q5VT06 3117 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 E2F8A0AVK6 867 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 G3V2L1 256 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 HGSO14964 777 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TGM5O43548 720 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TSPAN3O60637 253 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 H2AFYO75367 372 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 GJB3O75712 270 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 RALBP11234 206 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 STMN1P16949 149 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 GLDCP23378 1020 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CRABP2P29373 138 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 LEPRP48357 1165 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 SLC1A6P48664 564 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CLCN5P51795 746 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 POU4F1Q01851 419 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 NSUN2Q08J23 767 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CYTH1Q15438 398 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TTC31Q49AM3 519 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 LILRA6Q6PI73 481 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CCDC149Q6ZUS6 474 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 RAPH1Q70E73 1250 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ASRGL1Q7L266 308 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CLNKQ7Z7G1 428 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 SLC41A1Q8IVJ1 513 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 MFSD6LQ8IWD5 586 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ARL14EPQ8N8R7 260 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 CLP1Q92989 425 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 KLHL29Q96CT2 875 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 LRRC3Q9BY71 257 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 WWP1Q9H0M0 922 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 NMRAL1Q9HBL8 299 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 HEY2Q9UBP5 337 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ACOT9Q9Y305 439 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ARIH1Q9Y4X5 557 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ACTL7AQ9Y615 435 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 A0A087X1B8 175 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TYW5A2RUC4 315 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TMEM114B3SHH9 223 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 INSIG1O15503 277 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 PHGDHO43175 533 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ITM2AO43736 263 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 HNRNPCL1O60812 293 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 TBL1XO60907 577 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 ZMPSTE24O75844 475 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 LUC7L3O95232 432 aaKnown RBP11.86□□□□□ -0.51
SMAD3-202ENST00000439724 C1RP00736 705 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 LRG1P02750 347 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 PFKLP17858 780 aa11.86□□□□□ -0.51
SMAD3-202ENST00000439724 HDCP19113 662 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms