RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 ZNF670Q9BS34 389 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 ANP32EQ9BTT0 268 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 SLC17A9Q9BYT1 436 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 SUV39H2Q9H5I1 410 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 INTUQ9ULD6 942 aa24.3■■□□□ 1.48
CPNE1-217ENST00000439669 TRPM6Q9BX84 2022 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 SPINT1O43278 529 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 MTA2O94776 668 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 ARHGAP25P42331 645 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 CLDN2P57739 230 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 SGCGQ13326 291 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 ZNF235Q14590 738 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 PAF1Q8N7H5 531 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 NSMCE1Q8WV22 266 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 TUBGCP5Q96RT8 1024 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 ATP13A3Q9H7F0 1226 aa24.29■■□□□ 1.48
CPNE1-217ENST00000439669 IGLON5A6NGN9 336 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 AREL1O15033 823 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 MFSD11O43934 449 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 PAK4O96013 591 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-217ENST00000439669 TIMP2P16035 220 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 PMLP29590 882 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 MAGEA1P43355 309 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 CSNK1DP48730 415 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 ARRB1P49407 418 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-217ENST00000439669 RENBPP51606 427 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 FAM193AP78312 1265 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 SLC10A7Q0GE19 358 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 FGL2Q14314 439 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 TRIP6Q15654 476 aaKnown RBP24.28■■□□□ 1.48
CPNE1-217ENST00000439669 ANKRD20A8PQ5CZ79 823 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 SPATS2Q86XZ4 545 aaKnown RBP24.28■■□□□ 1.48
CPNE1-217ENST00000439669 CAMK1DQ8IU85 385 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 PCDH19Q8TAB3 1148 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 RHBDD1Q8TEB9 315 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 ZNF641Q96N77 438 aaPredicted RBP24.28■■□□□ 1.48
CPNE1-217ENST00000439669 PSKH2Q96QS6 385 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 PCOLCE2Q9UKZ9 415 aa24.28■■□□□ 1.48
CPNE1-217ENST00000439669 MUSKO15146 869 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 PCDHGA12O60330 932 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 BUB1BO60566 1050 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-217ENST00000439669 MAFKO60675 156 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 THEGLP0DJG4 465 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 SERPINA4P29622 427 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 SCNN1BP51168 640 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 FOXC1Q12948 553 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 INAVAQ3KP66 663 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 NCBP2-AS2Q69YL0 99 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 GCNT7Q6ZNI0 430 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 PTAR1Q7Z6K3 402 aaPredicted RBP24.27■■□□□ 1.48
CPNE1-217ENST00000439669 BBS5Q8N3I7 341 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 OXR1Q8N573 874 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 CXorf40AQ8TE69 158 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 BTBD3Q9Y2F9 522 aa24.27■■□□□ 1.48
CPNE1-217ENST00000439669 PCNX2A6NKB5 2137 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 TSPAN11A1L157 253 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 LRRD1A4D1F6 860 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 A6NNZ2 444 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 YKT6O15498 198 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 ITIH2P19823 946 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 CYLC1P35663 651 aaPredicted RBP24.26■■□□□ 1.47
CPNE1-217ENST00000439669 GRK6P43250 576 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 SUOXP51687 545 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 BCL2L1Q07817 233 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 NSUN2Q08J23 767 aaKnown RBP eCLIP24.26■■□□□ 1.47
CPNE1-217ENST00000439669 SPA17Q15506 151 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 BRAT1Q6PJG6 821 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 DBX2Q6ZNG2 339 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 GATAD2AQ86YP4 633 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 CCDC170Q8IYT3 715 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 OR13H1Q8NG92 308 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 HCAR2Q8TDS4 363 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 RAPGEF5Q92565 580 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 PANX2Q96RD6 677 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 WRAP53Q9BUR4 548 aaKnown RBP24.26■■□□□ 1.47
CPNE1-217ENST00000439669 C1QTNF2Q9BXJ5 285 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 ERVMER34-1Q9H9K5 563 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 CABIN1Q9Y6J0 2220 aa24.26■■□□□ 1.47
CPNE1-217ENST00000439669 RAD51BO15315 384 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 MMP20O60882 483 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 CBFA2T3O75081 653 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 MAP3K6O95382 1288 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 PEX11BO96011 259 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 ITGAVP06756 1048 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 KDELR1P24390 212 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 HSPA9P38646 679 aaKnown RBP24.25■■□□□ 1.47
CPNE1-217ENST00000439669 NOP2P46087 812 aaKnown RBP24.25■■□□□ 1.47
CPNE1-217ENST00000439669 AP1S1P61966 158 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 ELP6Q0PNE2 266 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 PAFAH1B3Q15102 231 aaKnown RBP24.25■■□□□ 1.47
CPNE1-217ENST00000439669 SHBQ15464 509 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 UGP2Q16851 508 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 FAF2Q96CS3 445 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 PCDH12Q9NPG4 1184 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 LUC7LQ9NQ29 371 aaKnown RBP24.25■■□□□ 1.47
CPNE1-217ENST00000439669 ANGPTL2Q9UKU9 493 aa24.25■■□□□ 1.47
CPNE1-217ENST00000439669 KRT1P04264 644 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 TNNT1P13805 278 aa24.24■■□□□ 1.47
CPNE1-217ENST00000439669 EPHA8P29322 1005 aaPredicted RBP24.24■■□□□ 1.47
CPNE1-217ENST00000439669 GARSP41250 739 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms