RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 C3orf20Q8ND61 904 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 TMIEQ8NEW7 156 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 OR2A12Q8NGT7 310 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 ZNF564Q8TBZ8 553 aaPredicted RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 FAM131CQ96AQ9 280 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 NXPE2Q96DL1 559 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 C16orf45Q96MC5 204 aaPredicted RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 SELENOOQ9BVL4 669 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 CALN1Q9BXU9 219 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 MRPL47Q9HD33 250 aaKnown RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 FZD3Q9NPG1 666 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 UVRAGQ9P2Y5 699 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 HS3ST2Q9Y278 367 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 SCINQ9Y6U3 715 aa9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 TP53BP1Q12888 1972 aaPredicted RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 GCN1Q92616 2671 aaKnown RBP9.37□□□□□ -0.91
AC011228.1-201ENST00000439027 TRPM6Q9BX84 2022 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 ILVBLA1L0T0 632 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 TMEM191CA6NGB0 347 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 SIGLEC16A6NMB1 481 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 TMEM110-MUSTN1A8MSY1 372 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 I6L893 689 aaPredicted RBP9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 TRIM38O00635 465 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 FFAR2O15552 330 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 SIGLEC6O43699 453 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 MTA2O94776 668 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 KRT3P12035 628 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 GLDCP23378 1020 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 FLT3P36888 993 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 GCGRP47871 477 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 CLDN2P57739 230 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 RPL7AP62424 266 aaKnown RBP9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 ILKQ13418 452 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 ACAP1Q15027 740 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 ZNF284Q2VY69 593 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 SOWAHCQ53LP3 525 aaPredicted RBP9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 RETSATQ6NUM9 610 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 NEK5Q6P3R8 708 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 C22orf39Q6P5X5 142 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 DPY19L3Q6ZPD9 716 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 ERN2Q76MJ5 926 aaKnown RBP9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 ZNF683Q8IZ20 524 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 RYBPQ8N488 228 aaPredicted RBP9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 DCAF4L2Q8NA75 395 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 TPCN2Q8NHX9 752 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 JOSD2Q8TAC2 188 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 TSC1Q92574 1164 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 NT5C3BQ969T7 300 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 PPP1R16AQ96I34 528 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 BTBD6Q96KE9 485 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 C1orf74Q96LT6 269 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 MCEEQ96PE7 176 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 TRIM7Q9C029 511 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 ATP13A1Q9HD20 1204 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 METTL5Q9NRN9 209 aaKnown RBP9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 KLHL11Q9NVR0 708 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 TMEM51Q9NW97 253 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 IL36AQ9UHA7 158 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 ANAPC7Q9UJX3 599 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 HELZ2Q9BYK8 2649 aaKnown RBP9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 CELSR3Q9NYQ7 3312 aa9.36□□□□□ -0.91
AC011228.1-201ENST00000439027 GRID2IPA4D2P6 1211 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 MYO1FO00160 1098 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 BUB1BO60566 1050 aaPredicted RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 LEFTY1O75610 366 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 PALMO75781 387 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 HNRNPA2B1P22626 353 aaKnown RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 DGKAP23743 735 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 SCNN1AP37088 669 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 ABCG1P45844 678 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 HADHBP55084 474 aaKnown RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 GSCP56915 257 aaPredicted RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 ATP11AP98196 1134 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 SLC20A2Q08357 652 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 ZNF211Q13398 564 aaPredicted RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 MESDQ14696 234 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 ZNF542PQ5EBM4 170 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 CARD16Q5EG05 197 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 ACBD5Q5T8D3 534 aaPredicted RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 SEL1L3Q68CR1 1132 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 RWDD4Q6NW29 188 aaKnown RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 FBXL19Q6PCT2 694 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 LRRC69Q6ZNQ3 347 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 Q6ZSR6 202 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 KANSL1Q7Z3B3 1105 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 PTAR1Q7Z6K3 402 aaPredicted RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 DAAM2Q86T65 1068 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 FAM131BQ86XD5 332 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 SLC35F6Q8N357 371 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 SLC25A45Q8N413 288 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 EMC1Q8N766 993 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 TRIM58Q8NG06 486 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 OR13H1Q8NG92 308 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 PGAP3Q96FM1 320 aaPredicted RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 CALR3Q96L12 384 aaKnown RBP9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 CFAP57Q96MR6 1250 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 ALS2CR12Q96Q35 445 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 HAPLN3Q96S86 360 aa9.35□□□□□ -0.91
AC011228.1-201ENST00000439027 HEPHQ9BQS7 1158 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms