RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PRIM2P49643 509 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 COMPP49747 757 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 POLE2P56282 527 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 ARL13BQ3SXY8 428 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 FNBP1LQ5T0N5 605 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 ANKRD40Q6AI12 368 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 TMEM88Q6PEY1 159 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 PRSS57Q6UWY2 283 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 ZNF329Q86UD4 541 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 SLC25A41Q8N5S1 370 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 IP6K1Q92551 441 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 MCRS1Q96EZ8 462 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 ADAD1Q96M93 576 aaKnown RBP3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 WDR77Q9BQA1 342 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 RTKNQ9BST9 563 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 PNRC2Q9NPJ4 139 aaKnown RBP3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 HELLSQ9NRZ9 838 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 RNF146Q9NTX7 359 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 CFDP1Q9UEE9 299 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 CA14Q9ULX7 337 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 DTNAQ9Y4J8 743 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 LTBP2Q14767 1821 aa3.18□□□□□ -1.9
HMGB1P18-201ENST00000438801 DMXL2Q8TDJ6 3036 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 PCLOQ9Y6V0 5065 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 LOC105369274A0A096LPK9 316 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 LOC102723532A0A0G2JNH3 316 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 TMEM8BA6NDV4 472 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 C3orf70A6NLC5 250 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 KCNJ18B7U540 433 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 M0QYT0 321 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 GRID2O43424 1007 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 GLUD1P00367 558 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 PRSS2P07478 247 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 SLC16A2P36021 539 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 GLUD2P49448 558 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 TAS2R50P59544 299 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 SELENOVP59797 346 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 ZP1P60852 638 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 TLE3Q04726 772 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 DSC1Q08554 894 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 DNTTIP2Q5QJE6 756 aaKnown RBP3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 DCAF12L2Q5VW00 463 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 MDGA2Q7Z553 956 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 C2CD5Q86YS7 1000 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 CAMK1DQ8IU85 385 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 FAM217AQ8IXS0 508 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 OR4N4Q8N0Y3 316 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 ZNF556Q9HAH1 456 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 ZNF304Q9HCX3 659 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 STARD7Q9NQZ5 370 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 FBXO4Q9UKT5 387 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 CRYBG3Q68DQ2 2970 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 SCN7AQ01118 1682 aa3.17□□□□□ -1.9
HMGB1P18-201ENST00000438801 SVILO95425 2214 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 ASXL3Q9C0F0 2248 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 CACNA1SQ13698 1873 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 WDFY3Q8IZQ1 3526 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 A0A1B0GUV1 79 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 PRSS47A8MTI9 375 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 BTBD18B2RXH4 712 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 I6L893 689 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 LINC01565O15544 149 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 LDB3O75112 727 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 NTSR2O95665 410 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 CER1O95813 267 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 PEPDP12955 493 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 SLC5A1P13866 664 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 CHRNB2P17787 502 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 ELAVL4P26378 380 aaKnown RBP3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 AVPR2P30518 371 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 PDLIM4P50479 330 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 ADPRHP54922 357 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 FOXL2P58012 376 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 ERVFC1-1P60608 527 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 RPL15P61313 204 aaKnown RBP3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 UBXN2AP68543 259 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 PMS2P11Q13670 270 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 GRM4Q14833 912 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 HIBCHQ6NVY1 386 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 ERAP2Q6P179 960 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 FBXO38Q6PIJ6 1188 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 C16orf82Q7Z2V1 217 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 TMPRSS12Q86WS5 348 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 DGKHQ86XP1 1220 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 KDM1BQ8NB78 822 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 ADAMTS14Q8WXS8 1223 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 POLDIP3Q9BY77 421 aaKnown RBP3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 EPS8L2Q9H6S3 715 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 CATSPERBQ9H7T0 1116 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 PLEKHB1Q9UF11 243 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 ITPR2Q14571 2701 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 RALGAPA2Q2PPJ7 1873 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 PLXNA1Q9UIW2 1896 aa3.16□□□□□ -1.9
HMGB1P18-201ENST00000438801 RGPD5Q99666 1765 aa3.15□□□□□ -1.9
HMGB1P18-201ENST00000438801 CHD9Q3L8U1 2897 aa3.15□□□□□ -1.9
HMGB1P18-201ENST00000438801 CPDO75976 1380 aa3.15□□□□□ -1.9
HMGB1P18-201ENST00000438801 NSD2O96028 1365 aa3.15□□□□□ -1.9
HMGB1P18-201ENST00000438801 ANKRD36BQ8N2N9 1353 aa3.15□□□□□ -1.9
HMGB1P18-201ENST00000438801 CYP3A7-CYP3A51PA0A087WV96 503 aa3.15□□□□□ -1.91
HMGB1P18-201ENST00000438801 TRBV5-7A0A0A0MS05 114 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms