RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 PIGNO95427 931 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 TIMP2P16035 220 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 HNRNPA2B1P22626 353 aaKnown RBP18.01■□□□□ 0.47
NCSTN-208ENST00000438008 NOVA1P51513 510 aaKnown RBP18.01■□□□□ 0.47
NCSTN-208ENST00000438008 GALNT2Q10471 571 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 STAT4Q14765 748 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 SEL1L3Q68CR1 1132 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 RHOT1Q8IXI2 618 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 ASB12Q8WXK4 309 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 RNF157Q96PX1 679 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 SLC17A9Q9BYT1 436 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 SLC32A1Q9H598 525 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 TM7SF3Q9NS93 570 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 ADAMTS9Q9P2N4 1935 aa18.01■□□□□ 0.47
NCSTN-208ENST00000438008 C3orf70A6NLC5 250 aaPredicted RBP18■□□□□ 0.47
NCSTN-208ENST00000438008 PRLRP16471 622 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 CR2P20023 1033 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 COMTP21964 271 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 AKT2P31751 481 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 GARSP41250 739 aaKnown RBP18■□□□□ 0.47
NCSTN-208ENST00000438008 NOP2P46087 812 aaKnown RBP18■□□□□ 0.47
NCSTN-208ENST00000438008 NXPH1P58417 271 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 AP1S1P61966 158 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 HNRNPDQ14103 355 aaKnown RBP18■□□□□ 0.47
NCSTN-208ENST00000438008 FGL2Q14314 439 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 ZFYVE27Q5T4F4 411 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 PSAPL1Q6NUJ1 521 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 BRAT1Q6PJG6 821 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 BBS5Q8N3I7 341 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 TEX26Q8N6G2 289 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 DEFB124Q8NES8 71 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 FAM174AQ8TBP5 190 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 NSMCE1Q8WV22 266 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 KLK6Q92876 244 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 FATE1Q969F0 183 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 ECHDC3Q96DC8 303 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 CALR3Q96L12 384 aaKnown RBP18■□□□□ 0.47
NCSTN-208ENST00000438008 TSGA13Q96PP4 275 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 C1QTNF2Q9BXJ5 285 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 ATP13A3Q9H7F0 1226 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 ERVMER34-1Q9H9K5 563 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 DDX56Q9NY93 547 aaKnown RBP18■□□□□ 0.47
NCSTN-208ENST00000438008 HS3ST3A1Q9Y663 406 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 ALG6Q9Y672 507 aa18■□□□□ 0.47
NCSTN-208ENST00000438008 ASCC3Q8N3C0 2202 aaKnown RBP17.99■□□□□ 0.47
NCSTN-208ENST00000438008 PLXNA2O75051 1894 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 A0A1B0GTQ1 180 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 LRRD1A4D1F6 860 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 H0Y8X5 98 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 NEMP1O14524 444 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 KCNK3O14649 394 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 IPO7O95373 1038 aaKnown RBP17.99■□□□□ 0.47
NCSTN-208ENST00000438008 SERPINA4P29622 427 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 SCNN1BP51168 640 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 ZNF235Q14590 738 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 UGP2Q16851 508 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 RALGPS1Q5JS13 557 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 MARC1Q5VT66 337 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 RAD9BQ6WBX8 426 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 CAMK1DQ8IU85 385 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 SPOCK2Q92563 424 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 LENG8Q96PV6 779 aaPredicted RBP17.99■□□□□ 0.47
NCSTN-208ENST00000438008 ELF4Q99607 663 aaPredicted RBP17.99■□□□□ 0.47
NCSTN-208ENST00000438008 BAG1Q99933 345 aaPredicted RBP17.99■□□□□ 0.47
NCSTN-208ENST00000438008 MGME1Q9BQP7 344 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 GDF3Q9NR23 364 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 GGT7Q9UJ14 662 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 TFR2Q9UP52 801 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 ITM2BQ9Y287 266 aa17.99■□□□□ 0.47
NCSTN-208ENST00000438008 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.98■□□□□ 0.47
NCSTN-208ENST00000438008 IGLON5A6NGN9 336 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 TRAFD1O14545 582 aaPredicted RBP17.98■□□□□ 0.47
NCSTN-208ENST00000438008 GIPC1O14908 333 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 PSTPIP1O43586 416 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 SPOPO43791 374 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 SH3BP5O60239 455 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 PCDHGA12O60330 932 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 PAK4O96013 591 aaPredicted RBP17.98■□□□□ 0.47
NCSTN-208ENST00000438008 ADRB1P08588 477 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 MX2P20592 715 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 CCNCP24863 283 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 MMP13P45452 471 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 CCT8P50990 548 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 GBE1Q04446 702 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 BCL2L1Q07817 233 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 ELP6Q0PNE2 266 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 SUZ12Q15022 739 aaKnown RBP17.98■□□□□ 0.47
NCSTN-208ENST00000438008 IFI16Q16666 785 aaKnown RBP17.98■□□□□ 0.47
NCSTN-208ENST00000438008 TMEM52BQ4KMG9 183 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 SLC9A4Q6AI14 798 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 TIGD7Q6NT04 549 aaPredicted RBP17.98■□□□□ 0.47
NCSTN-208ENST00000438008 C11orf63Q6NUN7 778 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 ABI3BPQ7Z7G0 1075 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 SPATS2Q86XZ4 545 aaKnown RBP17.98■□□□□ 0.47
NCSTN-208ENST00000438008 TMEM139Q8IV31 216 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 NAXDQ8IW45 347 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 PGBD5Q8N414 524 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 OXR1Q8N573 874 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 MAML1Q92585 1016 aa17.98■□□□□ 0.47
NCSTN-208ENST00000438008 KLHDC7BQ96G42 594 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms