RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 CRYL1Q9Y2S2 319 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 ANKRD12Q6UB98 2062 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 TSC2P49815 1807 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 OAZ2O95190 189 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 TCN1P20061 433 aaPredicted RBP9.58□□□□□ -0.88
CUX1-206ENST00000437600 PAX3P23760 479 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 CCR1P32246 355 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 TAF10Q12962 218 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 KRT72Q14CN4 511 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 PTPRRQ15256 657 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 ZNF470Q6ECI4 717 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 CYS1Q717R9 158 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 ZC3HC1Q86WB0 502 aaKnown RBP9.58□□□□□ -0.88
CUX1-206ENST00000437600 DEFB107AQ8IZN7 70 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 PSMG2Q969U7 264 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 PHF21BQ96EK2 531 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 ACE2Q9BYF1 805 aaPredicted RBP9.58□□□□□ -0.88
CUX1-206ENST00000437600 ZCWPW1Q9H0M4 648 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 EIF2B3Q9NR50 452 aaKnown RBP9.58□□□□□ -0.88
CUX1-206ENST00000437600 CXXC1Q9P0U4 656 aaPredicted RBP9.58□□□□□ -0.88
CUX1-206ENST00000437600 IPO11Q9UI26 975 aaKnown RBP9.58□□□□□ -0.88
CUX1-206ENST00000437600 SQORQ9Y6N5 450 aa9.58□□□□□ -0.88
CUX1-206ENST00000437600 A0A088AWK7 358 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 E9PAM4 449 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 STX16-NPEPL1H3BU86 382 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 PIGNO95427 931 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 GALTP07902 379 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 DNAJB2P25686 324 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 SERPINB6P35237 376 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 CD86P42081 329 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 DSC2Q02487 901 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 SCAPQ12770 1279 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 CUL3Q13618 768 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 CSHL1Q14406 222 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 WASHC2DQ5SRD0 308 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 SPOUT1Q5T280 376 aaKnown RBP9.57□□□□□ -0.88
CUX1-206ENST00000437600 PIK3R6Q5UE93 754 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 C16orf59Q7L2K0 433 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 NUP93Q8N1F7 819 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 RYBPQ8N488 228 aaPredicted RBP9.57□□□□□ -0.88
CUX1-206ENST00000437600 TMEM151AQ8N4L1 468 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 TDRD5Q8NAT2 981 aaKnown RBP9.57□□□□□ -0.88
CUX1-206ENST00000437600 OR6P1Q8NGX9 317 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 SLC26A7Q8TE54 656 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 DNAJC9Q8WXX5 260 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 AUTS2Q8WXX7 1259 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 ABCC13Q9NSE7 274 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 NEU3Q9UQ49 428 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 PCDHB5Q9Y5E4 795 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 TRIM13O60858 407 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 TIMP1P01033 207 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 SLC35E2BP0CK96 405 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 PRSS56P0CW18 603 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 TFEBP19484 476 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 KCNA5P22460 613 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 CNTFP26441 200 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 CPOXP36551 454 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 TAS2R39P59534 338 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 PRPSAP1Q14558 356 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 RABGAP1LQ5R372 815 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 RASIP1Q5U651 963 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 RAP1GAP2Q684P5 730 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 ANO7Q6IWH7 933 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 SPRED2Q7Z698 418 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 DCP1BQ8IZD4 617 aaKnown RBP9.57□□□□□ -0.88
CUX1-206ENST00000437600 CENPLQ8N0S6 344 aaPredicted RBP9.57□□□□□ -0.88
CUX1-206ENST00000437600 FAM156AQ8NDB6 213 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 USP13Q92995 863 aaPredicted RBP9.57□□□□□ -0.88
CUX1-206ENST00000437600 EXT2Q93063 718 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 FBXO32Q969P5 355 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 ELMO2Q96JJ3 720 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 TBL1YQ9BQ87 522 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 NAT9Q9BTE0 207 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 IL22Q9GZX6 179 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 CCSER2Q9H7U1 834 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 GLOD4Q9HC38 313 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 XPR1Q9UBH6 696 aa9.57□□□□□ -0.88
CUX1-206ENST00000437600 ATP6AP2A0A1C7CYW4 349 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 MTMR11A4FU01 709 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 ATP6AP2O75787 350 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 VNN2O95498 520 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 SLC1A2P43004 574 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 SERPINB8P50452 374 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 C10orf120Q5SQS8 335 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 ITPRIPL1Q6GPH6 555 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 NAPEPLDQ6IQ20 393 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 CCNJLQ8IV13 435 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 DPF3Q92784 378 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 BHMTQ93088 406 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 IGSF8Q969P0 613 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 HMCESQ96FZ2 354 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 MRGPRX2Q96LB1 330 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 CATSPER2Q96P56 530 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 NOL6Q9H6R4 1146 aaKnown RBP9.56□□□□□ -0.88
CUX1-206ENST00000437600 TNFRSF12AQ9NP84 129 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 CORO1CQ9ULV4 474 aaPredicted RBP9.56□□□□□ -0.88
CUX1-206ENST00000437600 SOX13Q9UN79 622 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 AK5Q9Y6K8 562 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 NLRC5Q86WI3 1866 aa9.56□□□□□ -0.88
CUX1-206ENST00000437600 GOLGA8CPA6NN73 597 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms