RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 CSNK1DP48730 415 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 PAPOLAP51003 745 aaKnown RBP17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 DAB2P98082 770 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 RFTN1Q14699 578 aaPredicted RBP17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 CYTH1Q15438 398 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 BOLA3Q53S33 107 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 PPP6R3Q5H9R7 873 aaPredicted RBP17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 E4F1Q66K89 784 aaPredicted RBP17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 BRAT1Q6PJG6 821 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 LUZP1Q86V48 1076 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 BTN2A2Q8WVV5 523 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 TUBGCP5Q96RT8 1024 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 KLF6Q99612 283 aaPredicted RBP17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 PDFQ9HBH1 243 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 USP29Q9HBJ7 922 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 NLGN3Q9NZ94 848 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 MYO1AQ9UBC5 1043 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 LHX3Q9UBR4 397 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 CSNK1G3Q9Y6M4 447 aa17.75■□□□□ 0.43
SBDSP1-203ENST00000437201 PTPRBP23467 1997 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 FAM149AA5PLN7 773 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 TRIM38O00635 465 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 SCAMP1O15126 338 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 RAD51BO15315 384 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 CSF2P04141 144 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 TPM3P06753 285 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 NME1P15531 152 aaKnown RBP17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 TIMP2P16035 220 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 ERCC2P18074 760 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 DUSP3P51452 185 aaPredicted RBP17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 THOP1P52888 689 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 YPEL5P62699 121 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 ZBED6P86452 979 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 CAMK2BQ13554 666 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 PDE1CQ14123 709 aaPredicted RBP17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 FZD2Q14332 565 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 PIGHQ14442 188 aaPredicted RBP17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 CA9Q16790 459 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 ERAP2Q6P179 960 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 CACTIN-AS1Q8N1I8 211 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 ARFGAP1Q8N6T3 406 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 MDM1Q8TC05 714 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 CELF6Q96J87 481 aaKnown RBP17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 KCTD15Q96SI1 283 aaPredicted RBP17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 SLC39A8Q9C0K1 460 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 SUV39H2Q9H5I1 410 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 SP110Q9HB58 689 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 UCKL1Q9NWZ5 548 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 NCKIPSDQ9NZQ3 722 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 ITM2BQ9Y287 266 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 TRPM6Q9BX84 2022 aa17.74■□□□□ 0.43
SBDSP1-203ENST00000437201 ZZEF1O43149 2961 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 SPEGQ15772 3267 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 DMXL2Q8TDJ6 3036 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 H3BRJ5 948 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 J3KR12 359 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 TAF4O00268 1085 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 DFFAO00273 331 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 FFAR2O15552 330 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 MMP20O60882 483 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 LRCH4O75427 683 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 SERPING1P05155 500 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 SERPINA4P29622 427 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 ARL4AP40617 200 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 RENBPP51606 427 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 PFN3P60673 137 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 NSUN2Q08J23 767 aaKnown RBP eCLIP17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 UGP2Q16851 508 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 TMEM52BQ4KMG9 183 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 HES3Q5TGS1 186 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 TMCO4Q5TGY1 634 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 AFMIDQ63HM1 303 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 FAM181AQ8N9Y4 354 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 VOPP1Q96AW1 172 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 CENPTQ96BT3 561 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 NXPE2Q96DL1 559 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 EXOC2Q96KP1 924 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 PEBP4Q96S96 227 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 CINPQ9BW66 212 aaPredicted RBP17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 ATP13A3Q9H7F0 1226 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 GGT7Q9UJ14 662 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 CAPN11Q9UMQ6 739 aa17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 LUC7L2Q9Y383 392 aaKnown RBP17.73■□□□□ 0.43
SBDSP1-203ENST00000437201 PLXNB3Q9ULL4 1909 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 DOCK9Q9BZ29 2069 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 TSPAN11A1L157 253 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 TMEM110-MUSTN1A8MSY1 372 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 SPINT1O43278 529 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 CKMT1AP12532 417 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 POLR2LP62875 67 aaKnown RBP17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 IL10RBQ08334 325 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 CYP4F3Q08477 520 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 ZNF542PQ5EBM4 170 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 HGSNATQ68CP4 663 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 SRLQ86TD4 932 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 PAF1Q8N7H5 531 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 NETO2Q8NC67 525 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 RFFLQ8WZ73 363 aa17.72■□□□□ 0.43
SBDSP1-203ENST00000437201 ZNF599Q96NL3 588 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms