RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 KCNK3O14649 394 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 GJB3O75712 270 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 PEX11BO96011 259 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 MAT2AP31153 395 aaKnown RBP15.69■□□□□ 0.1
TREX1-201ENST00000433541 CSNK1DP48730 415 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 ADCY2Q08462 1091 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 PIP5KL1Q5T9C9 394 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 MEI1Q5TIA1 1274 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 ADAT2Q7Z6V5 191 aaKnown RBP15.69■□□□□ 0.1
TREX1-201ENST00000433541 CAMK1DQ8IU85 385 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 SYT12Q8IV01 421 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 BIRC7Q96CA5 298 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 ZNF419Q96HQ0 510 aaPredicted RBP15.69■□□□□ 0.1
TREX1-201ENST00000433541 ZNF641Q96N77 438 aaPredicted RBP15.69■□□□□ 0.1
TREX1-201ENST00000433541 AGAP3Q96P47 875 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 NUDCD1Q96RS6 583 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 SEMA3CQ99985 751 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 FAM118BQ9BPY3 351 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 MGME1Q9BQP7 344 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 KDM4CQ9H3R0 1056 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 SMOC1Q9H4F8 434 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 SUV39H2Q9H5I1 410 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 PREBQ9HCU5 417 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 SUSD2Q9UGT4 822 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 EFR3BQ9Y2G0 817 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 PCDHGA5Q9Y5G8 931 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 FRYLO94915 3013 aa15.69■□□□□ 0.1
TREX1-201ENST00000433541 TP53BP1Q12888 1972 aaPredicted RBP15.69■□□□□ 0.1
TREX1-201ENST00000433541 KIF5CO60282 957 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 RNGTTO60942 597 aaKnown RBP15.68■□□□□ 0.1
TREX1-201ENST00000433541 HLA-DQB2P05538 268 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 CA4P22748 312 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 PTPN7P35236 360 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 EIF3EP60228 445 aaKnown RBP15.68■□□□□ 0.1
TREX1-201ENST00000433541 OTUD4Q01804 1114 aaKnown RBP15.68■□□□□ 0.1
TREX1-201ENST00000433541 ZNF569Q5MCW4 686 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 ERAP2Q6P179 960 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 RABEPKQ7Z6M1 372 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 PRPF39Q86UA1 669 aaKnown RBP15.68■□□□□ 0.1
TREX1-201ENST00000433541 PGBD5Q8N414 524 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 ZCCHC9Q8N567 271 aaKnown RBP15.68■□□□□ 0.1
TREX1-201ENST00000433541 ACTL9Q8TC94 416 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 UBE2Q2Q8WVN8 375 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 MAML1Q92585 1016 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 RAB7BQ96AH8 199 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 OLFM3Q96PB7 478 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 NOD2Q9HC29 1040 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 VPS45Q9NRW7 570 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.68■□□□□ 0.1
TREX1-201ENST00000433541 PCDHGC4Q9Y5F7 938 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 FAM186AA6NE01 2351 aa15.68■□□□□ 0.1
TREX1-201ENST00000433541 OTOGLQ3ZCN5 2332 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 MYO15AQ9UKN7 3530 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 RIF1Q5UIP0 2472 aaKnown RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 GPR179Q6PRD1 2367 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 HACD1B0YJ81 288 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 MTSS1O43312 755 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 STK10O94804 968 aaKnown RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 C7P10643 843 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 EPHB1P54762 984 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 PPP2CBP62714 309 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 PPP2CAP67775 309 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 FAM193AP78312 1265 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 IFI35P80217 286 aaPredicted RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 DSC2Q02487 901 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 ZBTB17Q13105 803 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 NOMO1Q15155 1222 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 AASDHQ4L235 1098 aaPredicted RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 DARS2Q6PI48 645 aaKnown RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 BRAT1Q6PJG6 821 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 CDKL3Q8IVW4 592 aaPredicted RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 KIAA2013Q8IYS2 634 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 TEX26Q8N6G2 289 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 TTC13Q8NBP0 860 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 CXorf40AQ8TE69 158 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 KLK6Q92876 244 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 FATE1Q969F0 183 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 FEM1CQ96JP0 617 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 NUSAP1Q9BXS6 441 aaKnown RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 AASDHPPTQ9NRN7 309 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 SEMA4GQ9NTN9 838 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 KLHL8Q9P2G9 620 aaPredicted RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 AMACRQ9UHK6 382 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 ITM2BQ9Y287 266 aa15.67■□□□□ 0.1
TREX1-201ENST00000433541 EP300Q09472 2414 aaPredicted RBP15.67■□□□□ 0.1
TREX1-201ENST00000433541 A0A1W2PQU0 124 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 UPK3BL1B0FP48 263 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 UPK3BL2E5RIL1 263 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 ENC1O14682 589 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 KHNYNO15037 678 aaKnown RBP15.66■□□□□ 0.1
TREX1-201ENST00000433541 CPP00450 1065 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 SERPINF2P08697 491 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 CES1P23141 567 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 NFKBIAP25963 317 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 ABL2P42684 1182 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 TNNT3P45378 269 aaPredicted RBP15.66■□□□□ 0.1
TREX1-201ENST00000433541 POLR2LP62875 67 aaKnown RBP15.66■□□□□ 0.1
TREX1-201ENST00000433541 ELP6Q0PNE2 266 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 SGCGQ13326 291 aa15.66■□□□□ 0.1
TREX1-201ENST00000433541 PRKD1Q15139 912 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms