RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 IRF2BP2Q7Z5L9 587 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 DNAAF5Q86Y56 855 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 UMODL1-AS1Q8N2C9 162 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 CXorf40AQ8TE69 158 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 CASKIN2Q8WXE0 1202 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 ASB12Q8WXK4 309 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 CENPTQ96BT3 561 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 DUSP23Q9BVJ7 150 aa22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 TCEAL2Q9H3H9 227 aaPredicted RBP22.08■■□□□ 1.13
RPUSD3-206ENST00000433535 WASH4PA8MWX3 477 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 FGF10O15520 208 aaPredicted RBP22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 AQP9O43315 295 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 EIF2S3P41091 472 aaKnown RBP22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 CYTH1Q15438 398 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 DEFB133Q30KQ1 61 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 INO80DQ53TQ3 878 aaPredicted RBP22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 CACTIN-AS1Q8N1I8 211 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 FAM181AQ8N9Y4 354 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 LMX1AQ8TE12 382 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 CELF6Q96J87 481 aaKnown RBP22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 NCAPGQ9BPX3 1015 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 MBNL1Q9NR56 388 aaKnown RBP22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 UBA2Q9UBT2 640 aaPredicted RBP22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 PNMA8BQ9ULN7 279 aaPredicted RBP22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 AP4E1Q9UPM8 1137 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 MFHAS1Q9Y4C4 1052 aa22.07■■□□□ 1.12
RPUSD3-206ENST00000433535 LRRK1Q38SD2 2015 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 LRRC53A6NM62 1247 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 TM7SF2O76062 418 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 CCDC172P0C7W6 258 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 TIMP2P16035 220 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 TNFAIP3P21580 790 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 PSMA2P25787 234 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 THOP1P52888 689 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 MAMLD1Q13495 774 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 CDKN3Q16667 212 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 CA9Q16790 459 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 ANO6Q4KMQ2 910 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 CDCP2Q5VXM1 449 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 ZCCHC8Q6NZY4 707 aaKnown RBP22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 IFI44Q8TCB0 444 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 BBC3Q96PG8 261 aaPredicted RBP22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 LRRC19Q9H756 370 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 PDFQ9HBH1 243 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 DKK3Q9UBP4 350 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 APOBEC3BQ9UH17 382 aaKnown RBP22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 COQ6Q9Y2Z9 468 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 IGSF10Q6WRI0 2623 aa22.06■■□□□ 1.12
RPUSD3-206ENST00000433535 J3KR12 359 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 GP1BAP07359 652 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 DESP17661 470 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 DUSP3P51452 185 aaPredicted RBP22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 KLHL40Q2TBA0 621 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 GUSBP11Q6P575 273 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 PHACTR4Q8IZ21 702 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 TP53I13Q8NBR0 393 aaPredicted RBP22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 SNIP1Q8TAD8 396 aaKnown RBP22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 PEBP4Q96S96 227 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 DHX35Q9H5Z1 703 aaKnown RBP22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 USP29Q9HBJ7 922 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 EVA1BQ9NVM1 165 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 CSNK1G3Q9Y6M4 447 aa22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 COL27A1Q8IZC6 1860 aaPredicted RBP22.05■■□□□ 1.12
RPUSD3-206ENST00000433535 EEF2KO00418 725 aaKnown RBP22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 CSO75390 466 aaKnown RBP22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 GCATO75600 419 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 XPAP23025 273 aaPredicted RBP22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 C1orf61Q13536 156 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 IRF4Q15306 451 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 PRRT3Q5FWE3 981 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 E4F1Q66K89 784 aaPredicted RBP22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 ARFGAP1Q8N6T3 406 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 MAPK15Q8TD08 544 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 DEPDC7Q96QD5 511 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 SNRNP25Q9BV90 132 aaKnown RBP22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 LRRC61Q9BV99 259 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 C1QTNF7Q9BXJ2 289 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 CPEB1Q9BZB8 566 aaKnown RBP22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 TRIM7Q9C029 511 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 ABCG4Q9H172 646 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 PARVAQ9NVD7 372 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 PCSK1NQ9UHG2 260 aa22.04■■□□□ 1.12
RPUSD3-206ENST00000433535 BAHCC1Q9P281 2608 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 CPED1A4D0V7 1026 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 PRAMEF11O60813 436 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 MPOP05164 745 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 RGRP47804 291 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 PTK2BQ14289 1009 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 ASIC2Q16515 512 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 TBC1D25Q3MII6 688 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 PLEKHA7Q6IQ23 1121 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 CRTC1Q6UUV9 634 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 MACC1Q6ZN28 852 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 LRRC69Q6ZNQ3 347 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 EFL1Q7Z2Z2 1120 aaKnown RBP22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 VCPIP1Q96JH7 1222 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 KCTD15Q96SI1 283 aaPredicted RBP22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 IL12RB2Q99665 862 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 SLC39A8Q9C0K1 460 aa22.03■■□□□ 1.12
RPUSD3-206ENST00000433535 PCDH12Q9NPG4 1184 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms