RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 OR14C36Q8NHC7 312 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 BPIFA1Q9NP55 256 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 NPHS2Q9NP85 383 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 C5orf58C9J3I9 102 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 RPN2P04844 631 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 CDK7P50613 346 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 IL10RBQ08334 325 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 BOP1Q14137 746 aaKnown RBP13.04□□□□□ -0.32
PTCH1-207ENST00000429896 LVRNQ6Q4G3 990 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 OTOAQ7RTW8 1153 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 KIRREL3Q8IZU9 778 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 CMTM8Q8IZV2 173 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 KBTBD7Q8WVZ9 684 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 CYGBQ8WWM9 190 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 OTUB2Q96DC9 234 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 MTBPQ96DY7 904 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 RERGLQ9H628 205 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 ASB8Q9H765 288 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 GPSM3Q9Y4H4 160 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 FER1L6Q2WGJ9 1857 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 GMNCA6NCL1 334 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 CACNB4O00305 520 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-207ENST00000429896 COCHO43405 550 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 EPCAMP16422 314 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 RPL21P46778 160 aaKnown RBP13.04□□□□□ -0.32
PTCH1-207ENST00000429896 ANGPT1Q15389 498 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 INSCQ1MX18 579 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 C6orf10Q5SRN2 563 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 SMARCD2Q92925 531 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 OSBPL2Q9H1P3 480 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 TRIM45Q9H8W5 580 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-207ENST00000429896 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 RPL22P35268 128 aaKnown RBP13.04□□□□□ -0.32
PTCH1-207ENST00000429896 SLC16A1P53985 500 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 CLDN10P78369 228 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 LYPLAL1Q5VWZ2 237 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 ARID3BQ8IVW6 561 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-207ENST00000429896 FBXO25Q8TCJ0 367 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 LRRC37BQ96QE4 947 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 EBF3Q9H4W6 596 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 LRRC19Q9H756 370 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 YY1AP1Q9H869 796 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 GPAMQ9HCL2 828 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 FNIP2Q9P278 1114 aa13.04□□□□□ -0.32
PTCH1-207ENST00000429896 CAPZA2P47755 286 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 ZDHHC20Q5W0Z9 365 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 MARK2Q7KZI7 788 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 TCEAL8Q8IYN2 117 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 NIPA2Q8N8Q9 360 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 AHCYL2Q96HN2 611 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 CEP295NLQ96MC4 621 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 KLF6Q99612 283 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 PIGVQ9NUD9 493 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 DDX3YO15523 660 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 ENO3P13929 434 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 GABRB2P47870 512 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 RPS24P62847 133 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 PTP4A2Q12974 167 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 TEX44Q53QW1 395 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 C1orf220Q5T0J3 134 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 SH3PXD2AQ5TCZ1 1133 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 MBLAC2Q68D91 279 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 CES3Q6UWW8 571 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 PRPF39Q86UA1 669 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 LINC01465Q8N7H1 131 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 OR2W6PQ8NHA6 318 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 ZC4H2Q9NQZ6 224 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 VPS45Q9NRW7 570 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 APPL1Q9UKG1 709 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 RUVBL2Q9Y230 463 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 DYRK1BQ9Y463 629 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 NCF1BA6NI72 391 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 NCF1CA8MVU1 366 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 H3BMM5 538 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 IMPDH2P12268 514 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 NCF1P14598 390 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 CYP2A7P20853 494 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 POU4F1Q01851 419 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 GRTP1Q5TC63 336 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 FBXL22Q6P050 247 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 SLC26A11Q86WA9 606 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 CREG2Q8IUH2 290 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 PLD5Q8N7P1 536 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 TSC22D3Q99576 134 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 RAI2Q9Y5P3 530 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 ZNF132P52740 706 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 AP1S1P61966 158 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 C2orf27AQ580R0 203 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 SRLQ86TD4 932 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 CD101Q93033 1021 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 PSMG2Q969U7 264 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 QKIQ96PU8 341 aaKnown RBP eCLIP13.03□□□□□ -0.322e-7■■■■■ 29
PTCH1-207ENST00000429896 PABPC3Q9H361 631 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 CDC42EP4Q9H3Q1 356 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 MATN3O15232 486 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 WBP4O75554 376 aaKnown RBP13.03□□□□□ -0.32
PTCH1-207ENST00000429896 WNT3AP56704 352 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 ECT2LQ008S8 904 aa13.03□□□□□ -0.32
PTCH1-207ENST00000429896 GUCY1A3Q02108 690 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms