RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CATSPERBQ9H7T0 1116 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 DONSONQ9NYP3 566 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 DKK3Q9UBP4 350 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 KLF15Q9UIH9 416 aa15.09■□□□□ 0.01
MSH5-208ENST00000429846 SIGLEC16A6NMB1 481 aa15.08■□□□□ 0
MSH5-208ENST00000429846 WASH4PA8MWX3 477 aa15.08■□□□□ 0
MSH5-208ENST00000429846 FGF10O15520 208 aaPredicted RBP15.08■□□□□ 0
MSH5-208ENST00000429846 TCEA3O75764 348 aa15.08■□□□□ 0
MSH5-208ENST00000429846 GJB6O95452 261 aa15.08■□□□□ 0
MSH5-208ENST00000429846 MPOP05164 745 aa15.08■□□□□ 0
MSH5-208ENST00000429846 HTR7P34969 479 aa15.08■□□□□ 0
MSH5-208ENST00000429846 IGFALSP35858 605 aa15.08■□□□□ 0
MSH5-208ENST00000429846 RPIAP49247 311 aa15.08■□□□□ 0
MSH5-208ENST00000429846 ZNF143P52747 638 aaPredicted RBP15.08■□□□□ 0
MSH5-208ENST00000429846 C1QBPQ07021 282 aaKnown RBP15.08■□□□□ 0
MSH5-208ENST00000429846 ELP6Q0PNE2 266 aa15.08■□□□□ 0
MSH5-208ENST00000429846 CCDC173Q0VFZ6 552 aa15.08■□□□□ 0
MSH5-208ENST00000429846 EIF2B5Q13144 721 aaKnown RBP15.08■□□□□ 0
MSH5-208ENST00000429846 CDKN3Q16667 212 aa15.08■□□□□ 0
MSH5-208ENST00000429846 DEFB133Q30KQ1 61 aa15.08■□□□□ 0
MSH5-208ENST00000429846 TPRG1LQ5T0D9 272 aa15.08■□□□□ 0
MSH5-208ENST00000429846 ATXN7L2Q5T6C5 722 aaPredicted RBP15.08■□□□□ 0
MSH5-208ENST00000429846 DNAJC24Q6P3W2 148 aa15.08■□□□□ 0
MSH5-208ENST00000429846 WDR59Q6PJI9 974 aa15.08■□□□□ 0
MSH5-208ENST00000429846 CLEC17AQ6ZS10 378 aa15.08■□□□□ 0
MSH5-208ENST00000429846 PHLDB2Q86SQ0 1253 aa15.08■□□□□ 0
MSH5-208ENST00000429846 TTC7BQ86TV6 843 aa15.08■□□□□ 0
MSH5-208ENST00000429846 NEK11Q8NG66 645 aa15.08■□□□□ 0
MSH5-208ENST00000429846 WDR48Q8TAF3 677 aa15.08■□□□□ 0
MSH5-208ENST00000429846 HCAR2Q8TDS4 363 aa15.08■□□□□ 0
MSH5-208ENST00000429846 LMX1AQ8TE12 382 aa15.08■□□□□ 0
MSH5-208ENST00000429846 SLC39A7Q92504 469 aa15.08■□□□□ 0
MSH5-208ENST00000429846 NAT6Q93015 286 aa15.08■□□□□ 0
MSH5-208ENST00000429846 HIC2Q96JB3 615 aa15.08■□□□□ 0
MSH5-208ENST00000429846 PCDHB18PQ96TA0 734 aa15.08■□□□□ 0
MSH5-208ENST00000429846 BOCQ9BWV1 1114 aa15.08■□□□□ 0
MSH5-208ENST00000429846 CPEB1Q9BZB8 566 aaKnown RBP15.08■□□□□ 0
MSH5-208ENST00000429846 SLC13A1Q9BZW2 595 aa15.08■□□□□ 0
MSH5-208ENST00000429846 CAAP1Q9H8G2 361 aa15.08■□□□□ 0
MSH5-208ENST00000429846 THSD1Q9NS62 852 aa15.08■□□□□ 0
MSH5-208ENST00000429846 RAI2Q9Y5P3 530 aa15.08■□□□□ 0
MSH5-208ENST00000429846 RP1P56715 2156 aa15.07■□□□□ 0
MSH5-208ENST00000429846 TCRBV5S1A1TA0A578 114 aa15.07■□□□□ 0
MSH5-208ENST00000429846 CCP110O43303 1012 aa15.07■□□□□ 0
MSH5-208ENST00000429846 MYF5P13349 255 aa15.07■□□□□ 0
MSH5-208ENST00000429846 TGM2P21980 687 aa15.07■□□□□ 0
MSH5-208ENST00000429846 BLKP51451 505 aa15.07■□□□□ 0
MSH5-208ENST00000429846 COPB1P53618 953 aaKnown RBP15.07■□□□□ 0
MSH5-208ENST00000429846 C19orf57Q0VDD7 668 aa15.07■□□□□ 0
MSH5-208ENST00000429846 SERINC3Q13530 473 aa15.07■□□□□ 0
MSH5-208ENST00000429846 NR0B2Q15466 257 aa15.07■□□□□ 0
MSH5-208ENST00000429846 ISXQ2M1V0 245 aa15.07■□□□□ 0
MSH5-208ENST00000429846 C6orf132Q5T0Z8 1188 aa15.07■□□□□ 0
MSH5-208ENST00000429846 BROXQ5VW32 411 aa15.07■□□□□ 0
MSH5-208ENST00000429846 GUSBP11Q6P575 273 aa15.07■□□□□ 0
MSH5-208ENST00000429846 LEKR1Q6ZMV7 388 aa15.07■□□□□ 0
MSH5-208ENST00000429846 RBM43Q6ZSC3 357 aaKnown RBP15.07■□□□□ 0
MSH5-208ENST00000429846 VPS36Q86VN1 386 aa15.07■□□□□ 0
MSH5-208ENST00000429846 DNAAF5Q86Y56 855 aa15.07■□□□□ 0
MSH5-208ENST00000429846 PHACTR4Q8IZ21 702 aa15.07■□□□□ 0
MSH5-208ENST00000429846 UMODL1-AS1Q8N2C9 162 aa15.07■□□□□ 0
MSH5-208ENST00000429846 NCAPGQ9BPX3 1015 aa15.07■□□□□ 0
MSH5-208ENST00000429846 MAGEB5Q9BZ81 275 aa15.07■□□□□ 0
MSH5-208ENST00000429846 NOL6Q9H6R4 1146 aaKnown RBP15.07■□□□□ 0
MSH5-208ENST00000429846 BPTFQ12830 3046 aa15.07■□□□□ 0
MSH5-208ENST00000429846 LRRK1Q38SD2 2015 aa15.07■□□□□ 0
MSH5-208ENST00000429846 GCN1Q92616 2671 aaKnown RBP15.06■□□□□ 0
MSH5-208ENST00000429846 LRP4O75096 1905 aa15.06■□□□□ 0
MSH5-208ENST00000429846 CPED1A4D0V7 1026 aa15.06■□□□□ 0
MSH5-208ENST00000429846 LGALS16A8MUM7 142 aa15.06■□□□□ 0
MSH5-208ENST00000429846 RASA4BC9J798 803 aa15.06■□□□□ 0
MSH5-208ENST00000429846 LMO7DNF2Z398 122 aa15.06■□□□□ 0
MSH5-208ENST00000429846 RASA4O43374 803 aa15.06■□□□□ 0
MSH5-208ENST00000429846 CREB3O43889 395 aa15.06■□□□□ 0
MSH5-208ENST00000429846 MMP20O60882 483 aa15.06■□□□□ 0
MSH5-208ENST00000429846 ANXA6P08133 673 aa15.06■□□□□ 0
MSH5-208ENST00000429846 CCDC172P0C7W6 258 aa15.06■□□□□ 0
MSH5-208ENST00000429846 XPAP23025 273 aaPredicted RBP15.06■□□□□ 0
MSH5-208ENST00000429846 EIF4A3P38919 411 aaKnown RBP15.06■□□□□ 0
MSH5-208ENST00000429846 PEX5P50542 639 aa15.06■□□□□ 0
MSH5-208ENST00000429846 TMPRSS3P57727 454 aa15.06■□□□□ 0
MSH5-208ENST00000429846 PPARDQ03181 441 aa15.06■□□□□ 0
MSH5-208ENST00000429846 PRRT3Q5FWE3 981 aa15.06■□□□□ 0
MSH5-208ENST00000429846 PPP1R2P3Q6NXS1 205 aa15.06■□□□□ 0
MSH5-208ENST00000429846 SCYL2Q6P3W7 929 aa15.06■□□□□ 0
MSH5-208ENST00000429846 RBM44Q6ZP01 1051 aaKnown RBP15.06■□□□□ 0
MSH5-208ENST00000429846 EFL1Q7Z2Z2 1120 aaKnown RBP15.06■□□□□ 0
MSH5-208ENST00000429846 RBFAQ8N0V3 343 aa15.06■□□□□ 0
MSH5-208ENST00000429846 PYROXD2Q8N2H3 581 aa15.06■□□□□ 0
MSH5-208ENST00000429846 FSTL5Q8N475 847 aaPredicted RBP15.06■□□□□ 0
MSH5-208ENST00000429846 TP53I13Q8NBR0 393 aaPredicted RBP15.06■□□□□ 0
MSH5-208ENST00000429846 HMCESQ96FZ2 354 aa15.06■□□□□ 0
MSH5-208ENST00000429846 PCMTD1Q96MG8 357 aaPredicted RBP15.06■□□□□ 0
MSH5-208ENST00000429846 MCEEQ96PE7 176 aa15.06■□□□□ 0
MSH5-208ENST00000429846 ERGIC2Q96RQ1 377 aa15.06■□□□□ 0
MSH5-208ENST00000429846 CNPY3Q9BT09 278 aa15.06■□□□□ 0
MSH5-208ENST00000429846 LRRC61Q9BV99 259 aa15.06■□□□□ 0
MSH5-208ENST00000429846 ASCL3Q9NQ33 180 aa15.06■□□□□ 0
MSH5-208ENST00000429846 SEPT11Q9NVA2 429 aaKnown RBP15.06■□□□□ 0
MSH5-208ENST00000429846 FANCLQ9NW38 375 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 449 ms