RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MAP7Q14244 749 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 USP10Q14694 798 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 PDK3Q15120 406 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 SLC9B1Q4ZJI4 515 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 SFT2D3Q587I9 215 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 RAB41Q5JT25 222 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 THEMIS2Q5TEJ8 643 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 PKN3Q6P5Z2 889 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 CLEC20AQ6ZU45 233 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 PIWIL4Q7Z3Z4 852 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 CMC1Q7Z7K0 106 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 ZC3HC1Q86WB0 502 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 PLD6Q8N2A8 252 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 PHTF2Q8N3S3 785 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 SLC25A41Q8N5S1 370 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 KLHDC9Q8NEP7 349 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 PPHLN1Q8NEY8 458 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 PRSS33Q8NF86 280 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 DDI1Q8WTU0 396 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 STYXQ8WUJ0 223 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 LENG8Q96PV6 779 aaPredicted RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 FCRL5Q96RD9 977 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 HAPLN3Q96S86 360 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 MAGEB5Q9BZ81 275 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 NXF3Q9H4D5 531 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 ZNF385DQ9H6B1 395 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 TASP1Q9H6P5 420 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 SLC28A3Q9HAS3 691 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 CYP4F11Q9HBI6 524 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 EML4Q9HC35 981 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 WDR6Q9NNW5 1121 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 IARS2Q9NSE4 1012 aaKnown RBP8.8□□□□□ -1
GABPB1-205ENST00000429662 PIGVQ9NUD9 493 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 FNIP2Q9P278 1114 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 SLC17A6Q9P2U8 582 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 EPS15L1Q9UBC2 864 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 ADAMTS6Q9UKP5 1117 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 CDH9Q9ULB4 789 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 PADI4Q9UM07 663 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 NCOR2Q9Y618 2525 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 FAM186AA6NE01 2351 aa8.8□□□□□ -1
GABPB1-205ENST00000429662 E9PBE3 544 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 H3BNX3 289 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 KCNK1O00180 336 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 ZBTB14O43829 449 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 ATP9BO43861 1147 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 KLHL41O60662 606 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 RNASEH1O60930 286 aaKnown RBP8.79□□□□□ -1
GABPB1-205ENST00000429662 PDE5AO76074 875 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 PIGNO95427 931 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 SNAI1O95863 264 aaPredicted RBP8.79□□□□□ -1
GABPB1-205ENST00000429662 LTFP02788 710 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 ZCCHC18P0CG32 403 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 ZNF865P0CJ78 1059 aaPredicted RBP8.79□□□□□ -1
GABPB1-205ENST00000429662 SMIM10L2AP0DMW4 78 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 SMIM10L2BP0DMW5 78 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 SMPD1P17405 629 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 NFKB1P19838 968 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 ME2P23368 584 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 GSTT1P30711 240 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 ARRB2P32121 409 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 CD68P34810 354 aaPredicted RBP8.79□□□□□ -1
GABPB1-205ENST00000429662 PSMD8P48556 350 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 NUDT2P50583 147 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 RAB10P61026 200 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 POU4F1Q01851 419 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 USP4Q13107 963 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 STX5Q13190 355 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 MSLNQ13421 630 aaPredicted RBP8.79□□□□□ -1
GABPB1-205ENST00000429662 PPIGQ13427 754 aaKnown RBP eCLIP8.79□□□□□ -1
GABPB1-205ENST00000429662 PSMD5Q16401 504 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 CNPY1Q3B7I2 92 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 GRAMD1BQ3KR37 738 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 PIGGQ5H8A4 983 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 GLRA4Q5JXX5 417 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 VWA5B1Q5TIE3 1220 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 IRAK1BP1Q5VVH5 260 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 PM20D1Q6GTS8 502 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 TIGD7Q6NT04 549 aaPredicted RBP8.79□□□□□ -1
GABPB1-205ENST00000429662 CES3Q6UWW8 571 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 NAPRTQ6XQN6 538 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 KIAA0408Q6ZU52 694 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 PAQR9Q6ZVX9 377 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 TMC7Q7Z402 723 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 DPP9Q86TI2 863 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 OSTM1Q86WC4 334 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 HPS6Q86YV9 775 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 FAM126BQ8IXS8 530 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 DSELQ8IZU8 1212 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 AHI1Q8N157 1196 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 CEP70Q8NHQ1 597 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 DGCR14Q96DF8 476 aaKnown RBP8.79□□□□□ -1
GABPB1-205ENST00000429662 MAML3Q96JK9 1138 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 SCYL1Q96KG9 808 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 AGAP2Q99490 1192 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 OSMRQ99650 979 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 MRPL57Q9BQC6 102 aaKnown RBP8.79□□□□□ -1
GABPB1-205ENST00000429662 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 GORASP1Q9BQQ3 440 aa8.79□□□□□ -1
GABPB1-205ENST00000429662 MLPHQ9BV36 600 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms