RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 CTBP1Q13363 440 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 DMC1Q14565 340 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 OR4K2Q8NGD2 314 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 CXorf38Q8TB03 319 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 SIPA1Q96FS4 1042 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 H2AFY2Q9P0M6 372 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 NCANO14594 1321 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 GLYATL1P3A0A0U1RQE8 302 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 B2RBV5 119 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 NUDT2P50583 147 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 SLC16A1P53985 500 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 STX5Q13190 355 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 ATXN7L2Q5T6C5 722 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 LRRC39Q96DD0 335 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 CERS2Q96G23 380 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 E9PBE3 544 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 KLHL41O60662 606 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 ILF2Q12905 390 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 PWP1Q13610 501 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 RBFAQ8N0V3 343 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 KXD1Q9BQD3 176 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 NINJ2Q9NZG7 142 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 FLRT1Q9NZU1 646 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 KLQ9UEF7 1012 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 POLG2Q9UHN1 485 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 SNX5Q9Y5X3 404 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 LRCH4O75427 683 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 FAM107AO95990 144 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 IDSP22304 550 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 GUCA1AP43080 201 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 PIK3CGP48736 1102 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 GPR17Q13304 367 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 UAP1L1Q3KQV9 507 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 TEX44Q53QW1 395 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.22■□□□□ 0.358e-7■■■□□ 15.1
SMARCA4-203ENST00000429416 KRT78Q8N1N4 520 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 CEP70Q8NHQ1 597 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 STAG3L4Q8TBR4 150 aa17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-203ENST00000429416 KCNE1P15382 129 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 CXCR2P25025 360 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 TLX1P31314 330 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 ARHGAP17Q68EM7 881 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 PLEKHA7Q6IQ23 1121 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 RNF19BQ6ZMZ0 732 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 POMKQ9H5K3 350 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 ENTPD4Q9Y227 616 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 EN2P19622 333 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 CSKP41240 450 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 C2orf73Q8N5S3 287 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 PSMG2Q969U7 264 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 EXO5Q9H790 373 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 FANCEQ9HB96 536 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 CD3EAPO15446 510 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 CNMDO75829 334 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 GRK2P25098 689 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 ACTN3Q08043 901 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 NFYCQ13952 458 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 SPIDRQ14159 915 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 MFSD5Q6N075 450 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 CYB5D2Q8WUJ1 264 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 FAM83DQ9H4H8 585 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 RHPN2P1A8MT19 583 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 RIPK2O43353 540 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 ATG7O95352 703 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 PIGRP01833 764 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 L1CAMP32004 1257 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 SKIV2L2P42285 1042 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 CNGA3Q16281 694 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 KBTBD12Q3ZCT8 623 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 AASDHQ4L235 1098 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 FAM45BPQ6NSW5 357 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 MMAAQ8IVH4 418 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 FAM45AQ8TCE6 357 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 FAM124BQ9H5Z6 455 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 DZANK1Q9NVP4 752 aa17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 GPN3Q9UHW5 284 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-203ENST00000429416 PITPNM1O00562 1244 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 HCRTO43612 131 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 SERPINI2O75830 405 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 AKT2P31751 481 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 MAPKAPK2P49137 400 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 ATXN1P54253 815 aaKnown RBP17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 SEMG2Q02383 582 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 CDCA2Q69YH5 1023 aaPredicted RBP17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 STK32AQ8WU08 396 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 ZNF516Q92618 1163 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 CYP2S1Q96SQ9 504 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 CYLDQ9NQC7 956 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 DMAC2Q9NW81 257 aa17.21■□□□□ 0.34
SMARCA4-203ENST00000429416 TRIM13O60858 407 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 ATAD3BQ5T9A4 648 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 IL27RAQ6UWB1 636 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 SLC22A17Q8WUG5 538 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 SELENOMQ8WWX9 145 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 CDV3Q9UKY7 258 aaKnown RBP17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 PHTF1Q9UMS5 762 aa17.2■□□□□ 0.34
SMARCA4-203ENST00000429416 FPGTO14772 594 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms