RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CCDC172P0C7W6 258 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 ITPKBP27987 946 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 THOP1P52888 689 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 AIF1P55008 147 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 YBEYP58557 167 aaPredicted RBP17.29■□□□□ 0.36
TRIM39-209ENST00000428728 PFN3P60673 137 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 EIF2B5Q13144 721 aaKnown RBP17.29■□□□□ 0.36
TRIM39-209ENST00000428728 SERINC3Q13530 473 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 DEFB133Q30KQ1 61 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 PARP15Q460N3 678 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 RBFAQ8N0V3 343 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 LMX1AQ8TE12 382 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 CASKIN2Q8WXE0 1202 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 CELF6Q96J87 481 aaKnown RBP17.29■□□□□ 0.36
TRIM39-209ENST00000428728 DUSP23Q9BVJ7 150 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 EVA1BQ9NVM1 165 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 UBA2Q9UBT2 640 aaPredicted RBP17.29■□□□□ 0.36
TRIM39-209ENST00000428728 AP4E1Q9UPM8 1137 aa17.29■□□□□ 0.36
TRIM39-209ENST00000428728 WASH4PA8MWX3 477 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 FGF10O15520 208 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-209ENST00000428728 TM7SF2O76062 418 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 MBD3O95983 291 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 TNFAIP3P21580 790 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 XPAP23025 273 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-209ENST00000428728 PSMA2P25787 234 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 CDKN3Q16667 212 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 ANO6Q4KMQ2 910 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 SOWAHCQ53LP3 525 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-209ENST00000428728 INO80DQ53TQ3 878 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-209ENST00000428728 ZCCHC8Q6NZY4 707 aaKnown RBP17.28■□□□□ 0.36
TRIM39-209ENST00000428728 LRRC69Q6ZNQ3 347 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 IRF2BP2Q7Z5L9 587 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 DNAAF5Q86Y56 855 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 UMODL1-AS1Q8N2C9 162 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 FAM181AQ8N9Y4 354 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 IFI44Q8TCB0 444 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 ASB12Q8WXK4 309 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 CENPTQ96BT3 561 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 TCEAL2Q9H3H9 227 aaPredicted RBP17.28■□□□□ 0.36
TRIM39-209ENST00000428728 DHX35Q9H5Z1 703 aaKnown RBP17.28■□□□□ 0.36
TRIM39-209ENST00000428728 APOBEC3BQ9UH17 382 aaKnown RBP17.28■□□□□ 0.36
TRIM39-209ENST00000428728 COQ6Q9Y2Z9 468 aa17.28■□□□□ 0.36
TRIM39-209ENST00000428728 LRRC53A6NM62 1247 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 TIMP2P16035 220 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 EIF2S3P41091 472 aaKnown RBP17.27■□□□□ 0.36
TRIM39-209ENST00000428728 DUSP3P51452 185 aaPredicted RBP17.27■□□□□ 0.36
TRIM39-209ENST00000428728 IRF4Q15306 451 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 CYTH1Q15438 398 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 CA9Q16790 459 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 KLHL40Q2TBA0 621 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 GUSBP11Q6P575 273 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 PHACTR4Q8IZ21 702 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 CACTIN-AS1Q8N1I8 211 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 DEPDC7Q96QD5 511 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 SYT11Q9BT88 431 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 SNRNP25Q9BV90 132 aaKnown RBP17.27■□□□□ 0.36
TRIM39-209ENST00000428728 C1QTNF7Q9BXJ2 289 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 MBNL1Q9NR56 388 aaKnown RBP17.27■□□□□ 0.36
TRIM39-209ENST00000428728 TMEM63CQ9P1W3 806 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 DKK3Q9UBP4 350 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 PCSK1NQ9UHG2 260 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 MFHAS1Q9Y4C4 1052 aa17.27■□□□□ 0.36
TRIM39-209ENST00000428728 CPED1A4D0V7 1026 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 J3KR12 359 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 EEF2KO00418 725 aaKnown RBP17.26■□□□□ 0.35
TRIM39-209ENST00000428728 CSO75390 466 aaKnown RBP17.26■□□□□ 0.35
TRIM39-209ENST00000428728 MAMLD1Q13495 774 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 C1orf61Q13536 156 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 ASIC2Q16515 512 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 PRRT3Q5FWE3 981 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 CFAP58Q5T655 872 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 CDCP2Q5VXM1 449 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 CRTC1Q6UUV9 634 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 TP53I13Q8NBR0 393 aaPredicted RBP17.26■□□□□ 0.35
TRIM39-209ENST00000428728 SNIP1Q8TAD8 396 aaKnown RBP17.26■□□□□ 0.35
TRIM39-209ENST00000428728 MAPK15Q8TD08 544 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 PEBP4Q96S96 227 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 IL12RB2Q99665 862 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 LRRC61Q9BV99 259 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 TRIM7Q9C029 511 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 NAT10Q9H0A0 1025 aaKnown RBP17.26■□□□□ 0.35
TRIM39-209ENST00000428728 ABCG4Q9H172 646 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 LRRC19Q9H756 370 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 PDFQ9HBH1 243 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 USP29Q9HBJ7 922 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 PARVAQ9NVD7 372 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 SPASTQ9UBP0 616 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 PNMA8BQ9ULN7 279 aaPredicted RBP17.26■□□□□ 0.35
TRIM39-209ENST00000428728 CSNK1G3Q9Y6M4 447 aa17.26■□□□□ 0.35
TRIM39-209ENST00000428728 ATRXP46100 2492 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 RRP8O43159 456 aaKnown RBP17.25■□□□□ 0.35
TRIM39-209ENST00000428728 MPOP05164 745 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 GP1BAP07359 652 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 HTR7P34969 479 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 ACTN2P35609 894 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 ELP6Q0PNE2 266 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 CCDC173Q0VFZ6 552 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 PTK2BQ14289 1009 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 TCEA2Q15560 299 aa17.25■□□□□ 0.35
TRIM39-209ENST00000428728 TBC1D25Q3MII6 688 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms