RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 CABYRO75952 493 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 ATP5BP06576 529 aaKnown RBP11.73□□□□□ -0.53
FIRRE-201ENST00000427391 CD151P48509 253 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 MS4A13Q5J8X5 152 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 KDELC1Q6UW63 502 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 PIM3Q86V86 326 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 KLHDC8BQ8IXV7 354 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 ANKRD49Q8WVL7 239 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 RCN3Q96D15 328 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 PHF21BQ96EK2 531 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 UPF3AQ9H1J1 476 aaKnown RBP11.73□□□□□ -0.53
FIRRE-201ENST00000427391 CRISPLD1Q9H336 500 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 GTSE1Q9NYZ3 720 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 ZCCHC18P0CG32 403 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 CPB1P15086 417 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 HDCP19113 662 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 PEX19P40855 299 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 ZNF135P52742 658 aaPredicted RBP11.73□□□□□ -0.53
FIRRE-201ENST00000427391 TBX4P57082 545 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 ASPHQ12797 758 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 CDC16Q13042 620 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 MTA1Q13330 715 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 MAPRE1Q15691 268 aaKnown RBP11.73□□□□□ -0.53
FIRRE-201ENST00000427391 SH2D4BQ5SQS7 431 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 ISLR2Q6UXK2 745 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 CNTN4Q8IWV2 1026 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 PGBD5Q8N414 524 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 C2CD4AQ8NCU7 369 aaPredicted RBP11.73□□□□□ -0.53
FIRRE-201ENST00000427391 OR6P1Q8NGX9 317 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 SREK1Q8WXA9 508 aaKnown RBP11.73□□□□□ -0.53
FIRRE-201ENST00000427391 ENTPD7Q9NQZ7 604 aa11.73□□□□□ -0.53
FIRRE-201ENST00000427391 MMP2P08253 660 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 SKIP12755 728 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 MYL4P12829 197 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 PEX2P28328 305 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 CYP2C18P33260 490 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 ACVRL1P37023 503 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 TRIM71Q2Q1W2 868 aaKnown RBP11.72□□□□□ -0.53
FIRRE-201ENST00000427391 FSCBQ5H9T9 825 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 AFMIDQ63HM1 303 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 POTEHQ6S545 545 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 GLB1LQ6UWU2 654 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 KDM1BQ8NB78 822 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 FAM156AQ8NDB6 213 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 IGSF5Q9NSI5 407 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 CORO1CQ9ULV4 474 aaPredicted RBP11.72□□□□□ -0.53
FIRRE-201ENST00000427391 ARHGAP26Q9UNA1 814 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 CRYL1Q9Y2S2 319 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 NT5C1B-RDH14C9J2C7 533 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 PSMD3O43242 534 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 SLC4A1P02730 911 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 PRSS56P0CW18 603 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 RAG1P15918 1043 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 DPP6P42658 865 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 KCNC1P48547 511 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 NSUN2Q08J23 767 aaKnown RBP eCLIP11.72□□□□□ -0.53
FIRRE-201ENST00000427391 SFT2D3Q587I9 215 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 TMCO4Q5TGY1 634 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 FBXL22Q6P050 247 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 TRIM67Q6ZTA4 783 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 CFAP52Q8N1V2 620 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 SCML4Q8N228 414 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 FBXW8Q8N3Y1 598 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 LZTR1Q8N653 840 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 OR13J1Q8NGT2 312 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 EXT2Q93063 718 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 HDAC10Q969S8 669 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 SERPINB11Q96P15 392 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 EBF3Q9H4W6 596 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 TBC1D13Q9NVG8 400 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 PCDHB8Q9UN66 801 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 ANKRD6Q9Y2G4 727 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 COL4A4P53420 1690 aaPredicted RBP11.72□□□□□ -0.53
FIRRE-201ENST00000427391 MIA3Q5JRA6 1907 aa11.72□□□□□ -0.53
FIRRE-201ENST00000427391 MUSKO15146 869 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 CCDC166P0CW27 439 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 ENO3P13929 434 aaPredicted RBP11.71□□□□□ -0.53
FIRRE-201ENST00000427391 TCN1P20061 433 aaPredicted RBP11.71□□□□□ -0.53
FIRRE-201ENST00000427391 SP100P23497 879 aaPredicted RBP11.71□□□□□ -0.53
FIRRE-201ENST00000427391 THOP1P52888 689 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 SLC12A2P55011 1212 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 BTKQ06187 659 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
FIRRE-201ENST00000427391 RASIP1Q5U651 963 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 CCSAPQ6IQ19 270 aaPredicted RBP11.71□□□□□ -0.53
FIRRE-201ENST00000427391 DHDDSQ86SQ9 333 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 ZNF683Q8IZ20 524 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 NUP93Q8N1F7 819 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 SLC39A13Q96H72 371 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 CDRT15Q96T59 188 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 NPAS2Q99743 824 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 ECSITQ9BQ95 431 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 MRPL46Q9H2W6 279 aaKnown RBP11.71□□□□□ -0.53
FIRRE-201ENST00000427391 FAM96AQ9H5X1 160 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 SP110Q9HB58 689 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 NSMCE4AQ9NXX6 385 aa11.71□□□□□ -0.53
FIRRE-201ENST00000427391 UXTQ9UBK9 157 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms