RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ZNF354CQ86Y25 554 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 TEX26Q8N6G2 289 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 PCDH20Q8N6Y1 951 aaKnown RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 UBL4BQ8N7F7 174 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 CHST14Q8NCH0 376 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 ZBTB44Q8NCP5 570 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 MDGA1Q8NFP4 955 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 HMGB4Q8WW32 186 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 EDARADDQ8WWZ3 215 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 MAML1Q92585 1016 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 FATE1Q969F0 183 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 NSMCE3Q96MG7 304 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 SLC30A3Q99726 388 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 FAM126AQ9BYI3 521 aaPredicted RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 TNKS2Q9H2K2 1166 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 FBRSQ9HAH7 460 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 ITM2CQ9NQX7 267 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 LHX3Q9UBR4 397 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 UBA2Q9UBT2 640 aaPredicted RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 GDF2Q9UK05 429 aaPredicted RBP7.53□□□□□ -1.2
LINC01049-201ENST00000426840 PPM1HQ9ULR3 514 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 HEY1Q9Y5J3 304 aa7.53□□□□□ -1.2
LINC01049-201ENST00000426840 EML5Q05BV3 1969 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 SHROOM3Q8TF72 1996 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 MUSKO15146 869 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 MATN3O15232 486 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 ALOX15BO15296 676 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 INSIG1O15503 277 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 CTSLP07711 333 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 ARAFP10398 606 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 PECAM1P16284 738 aaPredicted RBP7.52□□□□□ -1.21
LINC01049-201ENST00000426840 TGM2P21980 687 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 CHRNA3P32297 505 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 SLC8A1P32418 973 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 CETN2P41208 172 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 P2RY2P41231 377 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 RGRP47804 291 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 CSNK1DP48730 415 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 NR2C2P49116 596 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 DNA2P51530 1060 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 METAP1P53582 386 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 DYNLT1P63172 113 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF33AQ06730 810 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 NSUN2Q08J23 767 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINC01049-201ENST00000426840 SRSF5Q13243 272 aaKnown RBP7.52□□□□□ -1.21
LINC01049-201ENST00000426840 HNRNPDQ14103 355 aaKnown RBP7.52□□□□□ -1.21
LINC01049-201ENST00000426840 RFTN1Q14699 578 aaPredicted RBP7.52□□□□□ -1.21
LINC01049-201ENST00000426840 NAA30Q147X3 362 aaPredicted RBP7.52□□□□□ -1.21
LINC01049-201ENST00000426840 MYLK3Q32MK0 819 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF569Q5MCW4 686 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 TMCO4Q5TGY1 634 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 B4GALNT4Q76KP1 1039 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 SYT9Q86SS6 491 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 LONP2Q86WA8 852 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 CCDC50Q8IVM0 306 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 SLC35F6Q8N357 371 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 PGBD5Q8N414 524 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 FRMD1Q8N878 549 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 TMIEQ8NEW7 156 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 OR2AP1Q8NGE2 309 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 RLN3Q8WXF3 142 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 PRCCQ92733 491 aaPredicted RBP7.52□□□□□ -1.21
LINC01049-201ENST00000426840 HDAC11Q96DB2 347 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 SIPA1Q96FS4 1042 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 ZNF599Q96NL3 588 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 OLFM3Q96PB7 478 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 ALS2CR12Q96Q35 445 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 PSKH2Q96QS6 385 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 LGMNQ99538 433 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 TPSD1Q9BZJ3 242 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 TM6SF2Q9BZW4 377 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 SP110Q9HB58 689 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 CD93Q9NPY3 652 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 ZSCAN32Q9NX65 697 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 USP36Q9P275 1121 aaKnown RBP7.52□□□□□ -1.21
LINC01049-201ENST00000426840 KLF15Q9UIH9 416 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 SARDHQ9UL12 918 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 ABCA7Q8IZY2 2146 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 CACNA1HO95180 2353 aa7.52□□□□□ -1.21
LINC01049-201ENST00000426840 FANCMQ8IYD8 2048 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 IGHV1OR15-9A0A0B4J2B8 117 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 TCRBV7S2A1N4TA0A589 114 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 GOLGA6L9A6NEM1 432 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 TGFBR3LH3BV60 316 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 APOC4-APOC2K7ER74 178 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ENC1O14682 589 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 TJP3O95049 919 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 POP4O95707 220 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 GSRP00390 522 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 IGLV3-19P01714 112 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 APOC2P02655 101 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CR2P20023 1033 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ADH6P28332 368 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 GKP32189 559 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CNR2P34972 360 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 CCNHP51946 323 aaPredicted RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 RHOAP61586 193 aa7.51□□□□□ -1.21
LINC01049-201ENST00000426840 SNRPD1P62314 119 aaKnown RBP7.51□□□□□ -1.21
LINC01049-201ENST00000426840 ZBTB16Q05516 673 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms