RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 NCSTNQ92542 709 aa4.78□□□□□ -1.64
LINC01040-201ENST00000425048 METTL14Q9HCE5 456 aaKnown RBP4.78□□□□□ -1.64
LINC01040-201ENST00000425048 ZNF224Q9NZL3 707 aa4.78□□□□□ -1.64
LINC01040-201ENST00000425048 KLHL42Q9P2K6 505 aa4.78□□□□□ -1.64
LINC01040-201ENST00000425048 SLCO3A1Q9UIG8 710 aa4.78□□□□□ -1.64
LINC01040-201ENST00000425048 CLDN16Q9Y5I7 305 aa4.78□□□□□ -1.64
LINC01040-201ENST00000425048 C16orf97H3BN30 126 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 SEPT4O43236 478 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 METTL18O95568 372 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 CTPS1P17812 591 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 ARHGAP8P85298 464 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 AP5B1Q2VPB7 878 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 C19orf48Q6RUI8 117 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 MYPOPQ86VE0 399 aaPredicted RBP4.77□□□□□ -1.65
LINC01040-201ENST00000425048 EPHX4Q8IUS5 362 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 ZNF527Q8NB42 609 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 OR13A1Q8NGR1 328 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 LNX1Q8TBB1 728 aaPredicted RBP4.77□□□□□ -1.65
LINC01040-201ENST00000425048 TANKQ92844 425 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 C8orf48Q96LL4 319 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 C3orf30Q96M34 536 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 TRAPPC9Q96Q05 1148 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 FBRSL1Q9HCM7 1045 aaKnown RBP4.77□□□□□ -1.65
LINC01040-201ENST00000425048 PTPRHQ9HD43 1115 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 ARFGAP3Q9NP61 516 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 ANKRD10Q9NXR5 420 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 SIX4Q9UIU6 781 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 KCND3Q9UK17 655 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 ZNF711Q9Y462 761 aa4.77□□□□□ -1.65
LINC01040-201ENST00000425048 CGNL1Q0VF96 1302 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 A0A0G2JPF8 293 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 A0A1B0GU03 582 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 FAM90A20PA6NIJ5 464 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 HNRNPCL3B7ZW38 293 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 HSPA12AO43301 675 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 HNRNPCL1O60812 293 aaKnown RBP4.76□□□□□ -1.65
LINC01040-201ENST00000425048 LINC00271P0C7V0 271 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 HNRNPCL4P0DMR1 293 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 PPM1AP35813 382 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 CENPAP49450 140 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 CLCN3P51790 818 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 PNLIPRP1P54315 467 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 KRTAP10-3P60369 221 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 SLC18A2Q05940 514 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 PDCLQ13371 301 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 IL13RA2Q14627 380 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 RPE65Q16518 533 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 PFKFB4Q16877 469 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 ZNF772Q68DY9 489 aaPredicted RBP4.76□□□□□ -1.65
LINC01040-201ENST00000425048 SHFQ7M4L6 423 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 SRLQ86TD4 932 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 MON1AQ86VX9 555 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 KBTBD3Q8NAB2 608 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 KCNH5Q8NCM2 988 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 YME1L1Q96TA2 773 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 CDC23Q9UJX2 597 aa4.76□□□□□ -1.65
LINC01040-201ENST00000425048 SLC25A17O43808 307 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 TIMP3P35625 211 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 PNPLA4P41247 253 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 PTPN9P43378 593 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 FUT6P51993 359 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 CHAF1AQ13111 956 aaPredicted RBP4.75□□□□□ -1.65
LINC01040-201ENST00000425048 THOC5Q13769 683 aaKnown RBP4.75□□□□□ -1.65
LINC01040-201ENST00000425048 OASLQ15646 514 aaKnown RBP4.75□□□□□ -1.65
LINC01040-201ENST00000425048 ME3Q16798 604 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 PGBD2Q6P3X8 592 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 FAM122CQ6P4D5 195 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 RRAGAQ7L523 313 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 ZC3HC1Q86WB0 502 aaKnown RBP4.75□□□□□ -1.65
LINC01040-201ENST00000425048 FAM186BQ8IYM0 893 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 SETD9Q8NE22 299 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 CREB3L4Q8TEY5 395 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 CSF3RQ99062 836 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 ZNF696Q9H7X3 374 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 LRRC4Q9HBW1 653 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 SPATS2LQ9NUQ6 558 aaKnown RBP4.75□□□□□ -1.65
LINC01040-201ENST00000425048 SLC9A2Q9UBY0 812 aa4.75□□□□□ -1.65
LINC01040-201ENST00000425048 IGKV3D-20A0A0C4DH25 116 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 SERPINC1P01008 464 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 ZNF883P0CG24 379 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 TFPIP10646 304 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 IL15P40933 162 aaPredicted RBP4.74□□□□□ -1.65
LINC01040-201ENST00000425048 PMP22Q01453 160 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 PICALMQ13492 652 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 RASGRP2Q7LDG7 609 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 SATL1Q86VE3 508 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 SFTPA2Q8IWL1 248 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 CIARTQ8N365 385 aaPredicted RBP4.74□□□□□ -1.65
LINC01040-201ENST00000425048 ARRDC2Q8TBH0 407 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 GRAPLQ8TC17 118 aaPredicted RBP4.74□□□□□ -1.65
LINC01040-201ENST00000425048 OTULINQ96BN8 352 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 PLEKHA2Q9HB19 425 aa4.74□□□□□ -1.65
LINC01040-201ENST00000425048 ATXN2Q99700 1313 aaKnown RBP4.73□□□□□ -1.65
LINC01040-201ENST00000425048 A0A1W2PS18 150 aa4.73□□□□□ -1.65
LINC01040-201ENST00000425048 ZNF587BE7ETH6 402 aa4.73□□□□□ -1.65
LINC01040-201ENST00000425048 WNT9BO14905 357 aa4.73□□□□□ -1.65
LINC01040-201ENST00000425048 HBP1O60381 514 aa4.73□□□□□ -1.65
LINC01040-201ENST00000425048 KRT5P13647 590 aa4.73□□□□□ -1.65
LINC01040-201ENST00000425048 MARK3P27448 753 aa4.73□□□□□ -1.65
LINC01040-201ENST00000425048 TTKP33981 857 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms