RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 MYF6P23409 242 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 PCSK6P29122 969 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 LRPAP1P30533 357 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 GTF2A2P52657 109 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 PITX1P78337 314 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 PDAP1Q13442 181 aaKnown RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 FASTKQ14296 549 aaKnown RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 FAM83EQ2M2I3 478 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TECRLQ5HYJ1 363 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 MARCH8Q5T0T0 291 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 AGAP9Q5VTM2 703 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 SYPL2Q5VXT5 272 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 PAQR9Q6ZVX9 377 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 SLC41A1Q8IVJ1 513 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 HERC6Q8IVU3 1022 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TXNDC5Q8NBS9 432 aaKnown RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 PPHLN1Q8NEY8 458 aaKnown RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 ZNF420Q8TAQ5 688 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 HMGCLL1Q8TB92 370 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 FNDC8Q8TC99 324 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TSPEARQ8WU66 669 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 NXNL1Q96CM4 212 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TSPAN17Q96FV3 270 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 SLC45A3Q96JT2 553 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 ASB2Q96Q27 587 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TCF12Q99081 682 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 IL12RB2Q99665 862 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TBL1YQ9BQ87 522 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 CD320Q9NPF0 282 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 ENTPD7Q9NQZ7 604 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TREX1Q9NSU2 369 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 DUS2Q9NX74 493 aaKnown RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 MTF2Q9Y483 593 aaPredicted RBP15.36■□□□□ 0.05
C9orf3-204ENST00000424143 TCAF1Q9Y4C2 921 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 HES2Q9Y543 173 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 CSADQ9Y600 493 aa15.36■□□□□ 0.05
C9orf3-204ENST00000424143 SMIM28A0A1B0GU29 152 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 FAM72CH0Y354 149 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 SPTLC1O15269 473 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 PFDN1O60925 122 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 RECQL4O94761 1208 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 HSD17B1P14061 328 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 ADRA1AP35348 466 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 MRPL19P49406 292 aaKnown RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 CLCN5P51795 746 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 GEMP55040 296 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 ESRRGP62508 458 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 FOXM1Q08050 763 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 BNIP2Q12982 314 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 OLIG2Q13516 323 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 GRIK4Q16099 956 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 FAM72AQ5TYM5 149 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 PRAMEF18Q5VWM3 479 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 FAM72DQ6L9T8 149 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 CLEC20AQ6ZU45 233 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 LPCAT2Q7L5N7 544 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 FAM72BQ86X60 149 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 CAMK1DQ8IU85 385 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 LRRC49Q8IUZ0 686 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 TP53INP2Q8IXH6 220 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 LZTR1Q8N653 840 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 NPWQ8N729 165 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 PCYOX1LQ8NBM8 494 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 OR2T34Q8NGX1 318 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 OR2T3Q8NH03 318 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 AGR3Q8TD06 166 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 CALML6Q8TD86 181 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 LRTOMTQ8WZ04 291 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.35■□□□□ 0.054e-7■■■■■ 53.9
C9orf3-204ENST00000424143 DOK1Q99704 481 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 GPATCH1Q9BRR8 931 aaKnown RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 TMEM79Q9BSE2 394 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 PDGFCQ9NRA1 345 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 IGSF5Q9NSI5 407 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 DDX18Q9NVP1 670 aaKnown RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 ABCD2Q9UBJ2 740 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 KCNH4Q9UQ05 1017 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 SH3PXD2BA1X283 911 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 PRORSD1PA6NEY8 169 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 H3BRB1 525 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 SRP72O76094 671 aaKnown RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 IPO13O94829 963 aaKnown RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 CCR10P46092 362 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 NME5P56597 212 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 TAS2R39P59534 338 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 MPP1Q00013 466 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 DGKDQ16760 1214 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 C6orf10Q5SRN2 563 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 DENND5AQ6IQ26 1287 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 KRT80Q6KB66 452 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 CNSTQ6PJW8 725 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 GADL1Q6ZQY3 521 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 GK5Q6ZS86 529 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 ZBTB49Q6ZSB9 765 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 CATSPER4Q7RTX7 472 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 ZNF467Q7Z7K2 595 aaPredicted RBP15.35■□□□□ 0.05
C9orf3-204ENST00000424143 OSTM1Q86WC4 334 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 DHFR2Q86XF0 187 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 FIBCD1Q8N539 461 aa15.35■□□□□ 0.05
C9orf3-204ENST00000424143 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms