RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PRAMEF33A0A0G2JMD5 474 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 TMEM110-MUSTN1A8MSY1 372 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 PRAMEF10O60809 474 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 TM7SF2O76062 418 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 SMC2O95347 1197 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 ITIH1P19827 911 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 CD82P27701 267 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 GKP32189 559 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 MARSP56192 900 aaKnown RBP16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 GNA12Q03113 381 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 STIM1Q13586 685 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 TTI2Q6NXR4 508 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 VASH2Q86V25 355 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 ZFAND4Q86XD8 727 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 ZDHHC17Q8IUH5 632 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 C1orf131Q8NDD1 294 aaKnown RBP16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 FAM81BQ96LP2 452 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 HAPLN3Q96S86 360 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 C1QTNF7Q9BXJ2 289 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 TM6SF2Q9BZW4 377 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 SIRPGQ9P1W8 387 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 STAP1Q9ULZ2 295 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 GPR34Q9UPC5 381 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 ACTL7AQ9Y615 435 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 UNC13CQ8NB66 2214 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 DOCK4Q8N1I0 1966 aa16.96■□□□□ 0.31
CHCHD3-202ENST00000423635 CLEC18AA5D8T8 446 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 MMP20O60882 483 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 SRGAP2O75044 1071 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 POP4O95707 220 aaKnown RBP16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 CTSEP14091 401 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 CD44P16070 742 aaKnown RBP16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 PNLIPP16233 465 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 PPP1R2P41236 205 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 CYP4F2P78329 520 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 DEUP1Q05D60 604 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 SMYD5Q6GMV2 418 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 CLEC18BQ6UXF7 455 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 TTC7BQ86TV6 843 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 GKN2Q86XP6 184 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 CLEC18CQ8NCF0 446 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 GPR156Q8NFN8 814 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 USP7Q93009 1102 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 SMARCE1Q969G3 411 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 CMKLR1Q99788 373 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 OSBPL1AQ9BXW6 950 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 ZYG11BQ9C0D3 744 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 TMPRSS4Q9NRS4 437 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 FOXJ2Q9P0K8 574 aa16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 PPARGC1AQ9UBK2 798 aaKnown RBP16.96■□□□□ 0.3
CHCHD3-202ENST00000423635 C9orf172C9J069 976 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 GNA14O95837 355 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 GSRP00390 522 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 GLB1P16278 677 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 ETV5P41161 510 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 SULT1E1P49888 294 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 ALG11Q2TAA5 492 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 MYLK3Q32MK0 819 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 SLC25A52Q3SY17 297 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 PTPN20Q4JDL3 420 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 OGFOD3Q6PK18 319 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 HID1Q8IV36 788 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 PASD1Q8IV76 773 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 RYBPQ8N488 228 aaPredicted RBP16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 OR2AP1Q8NGE2 309 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 OR6K2Q8NGY2 324 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 TSACCQ96A04 125 aaPredicted RBP16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 KLHL32Q96NJ5 620 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 EPAS1Q99814 870 aa16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.95■□□□□ 0.3
CHCHD3-202ENST00000423635 NBPF19A0A087WUL8 3843 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 TEX15Q9BXT5 2789 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 KRIT1O00522 736 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 RASGRP1O95267 797 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 UGT2B4P06133 528 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 ETFBP38117 255 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 SNRPD1P62314 119 aaKnown RBP16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 KLHL40Q2TBA0 621 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 BNIPLQ7Z465 357 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 CCNJLQ8IV13 435 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 SLITRK4Q8IW52 837 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 ZNF564Q8TBZ8 553 aaPredicted RBP16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 CXorf40AQ8TE69 158 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 ARHGEF2Q92974 986 aaKnown RBP16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 TBCBQ99426 244 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 SLC12A9Q9BXP2 914 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 RETREG1Q9H6L5 497 aa16.94■□□□□ 0.3
CHCHD3-202ENST00000423635 LRRK2Q5S007 2527 aa16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 CR2P20023 1033 aa16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 HTR1BP28222 390 aa16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 ACVRL1P37023 503 aa16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 SCNN1AP37088 669 aa16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 USP8P40818 1118 aa16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 GEMIN4P57678 1058 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 RNASE9P60153 205 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 SRP54P61011 504 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-202ENST00000423635 SERINC3Q13530 473 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms