RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SEL1L2Q5TEA6 688 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 C12orf50Q8NA57 414 aaPredicted RBP15.93■□□□□ 0.14
BRAT1-202ENST00000421712 PDCD6IPQ8WUM4 868 aaKnown RBP15.93■□□□□ 0.14
BRAT1-202ENST00000421712 UBE2Q2Q8WVN8 375 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 MAML1Q92585 1016 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 FATE1Q969F0 183 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 OLFM3Q96PB7 478 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 NUDCD1Q96RS6 583 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 SEMA3CQ99985 751 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 POLR1EQ9GZS1 481 aaKnown RBP15.93■□□□□ 0.14
BRAT1-202ENST00000421712 SMOC1Q9H4F8 434 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 NOD2Q9HC29 1040 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 VPS45Q9NRW7 570 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 SEMA4GQ9NTN9 838 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 TMEM74BQ9NUR3 256 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 PILRBQ9UKJ0 227 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 EFR3BQ9Y2G0 817 aa15.93■□□□□ 0.14
BRAT1-202ENST00000421712 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.93■□□□□ 0.14
BRAT1-202ENST00000421712 APOC4-APOC2K7ER74 178 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 KHNYNO15037 678 aaKnown RBP15.92■□□□□ 0.14
BRAT1-202ENST00000421712 RNGTTO60942 597 aaKnown RBP15.92■□□□□ 0.14
BRAT1-202ENST00000421712 LRP3O75074 770 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 APOC2P02655 101 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 TAS2R38P59533 333 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 LRRC73Q5JTD7 316 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 MEI1Q5TIA1 1274 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 PRPF39Q86UA1 669 aaKnown RBP15.92■□□□□ 0.14
BRAT1-202ENST00000421712 KIAA2013Q8IYS2 634 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 GPR161Q8N6U8 529 aaKnown RBP15.92■□□□□ 0.14
BRAT1-202ENST00000421712 RAB7BQ96AH8 199 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 FEM1CQ96JP0 617 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 AGAP3Q96P47 875 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 CEP41Q9BYV8 373 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 PREBQ9HCU5 417 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 DKK3Q9UBP4 350 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 SUSD2Q9UGT4 822 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 PCDHGC4Q9Y5F7 938 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 MYO15AQ9UKN7 3530 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 GPR179Q6PRD1 2367 aa15.92■□□□□ 0.14
BRAT1-202ENST00000421712 A0A1W2PQU0 124 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 HLA-DQB2P05538 268 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 TIMP2P16035 220 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 CD27P26842 260 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 PTPN7P35236 360 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 CCR5P51681 352 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 PPP2CBP62714 309 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 PPP2CAP67775 309 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 OTUD4Q01804 1114 aaKnown RBP15.91■□□□□ 0.14
BRAT1-202ENST00000421712 DSC2Q02487 901 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 CSRP2Q16527 193 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 DUOXA1Q1HG43 343 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 BRAT1Q6PJG6 821 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 RABEPKQ7Z6M1 372 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 ZCCHC9Q8N567 271 aaKnown RBP15.91■□□□□ 0.14
BRAT1-202ENST00000421712 CEP76Q8TAP6 659 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 HCAR2Q8TDS4 363 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 DNASE2BQ8WZ79 361 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 KLK6Q92876 244 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 FAM131CQ96AQ9 280 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 FERMT1Q9BQL6 677 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 HERPUD2Q9BSE4 406 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 AMACRQ9UHK6 382 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 FADS3Q9Y5Q0 445 aa15.91■□□□□ 0.14
BRAT1-202ENST00000421712 ZFHX2Q9C0A1 2572 aaPredicted RBP15.91■□□□□ 0.14
BRAT1-202ENST00000421712 HACD1B0YJ81 288 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 PATE3B3GLJ2 98 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 KCNK3O14649 394 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 BCAT2O15382 392 aaPredicted RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 IGHV4-34P06331 123 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 ZNF806P0C7X5 589 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 CR2P20023 1033 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 CES1P23141 567 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 ABL2P42684 1182 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 EIF3EP60228 445 aaKnown RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 POLR2LP62875 67 aaKnown RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 IFI35P80217 286 aaPredicted RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 ZBTB17Q13105 803 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 SF3A2Q15428 464 aaKnown RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 UGP2Q16851 508 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 TRIM61Q5EBN2 209 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 RALGPS1Q5JS13 557 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 ZNF569Q5MCW4 686 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 FAM182AQ5T1J6 154 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 ERAP2Q6P179 960 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 NEK5Q6P3R8 708 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 DARS2Q6PI48 645 aaKnown RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 ADAT2Q7Z6V5 191 aaKnown RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 REXO1L1PQ8IX06 675 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 ACTL9Q8TC94 416 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 CXorf40AQ8TE69 158 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 IL12RB2Q99665 862 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 FAM118BQ9BPY3 351 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 NUSAP1Q9BXS6 441 aaKnown RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 PARD6AQ9NPB6 346 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 TPX2Q9ULW0 747 aaKnown RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 ITM2BQ9Y287 266 aa15.9■□□□□ 0.14
BRAT1-202ENST00000421712 PTPRZ1P23471 2315 aaPredicted RBP15.9■□□□□ 0.14
BRAT1-202ENST00000421712 USP34Q70CQ2 3546 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 A0A1B0GTW7 788 aa15.89■□□□□ 0.13
BRAT1-202ENST00000421712 A0A1W2PPC4 97 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms