RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 MCEEQ96PE7 176 aa17.59■□□□□ 0.41
MSH6-203ENST00000420813 DEPDC7Q96QD5 511 aa17.59■□□□□ 0.41
MSH6-203ENST00000420813 C1QTNF7Q9BXJ2 289 aa17.59■□□□□ 0.41
MSH6-203ENST00000420813 DONSONQ9NYP3 566 aa17.59■□□□□ 0.41
MSH6-203ENST00000420813 SALL4Q9UJQ4 1053 aa17.59■□□□□ 0.41
MSH6-203ENST00000420813 U3KQA8 63 aa17.59■□□□□ 0.41
MSH6-203ENST00000420813 RASA4BC9J798 803 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 TPP1O14773 563 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 AQP9O43315 295 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 RASA4O43374 803 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 LZTS3O60299 673 aaPredicted RBP17.58■□□□□ 0.4
MSH6-203ENST00000420813 TM7SF2O76062 418 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 FERP16591 822 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 JUNDP17535 347 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 CDK11BP21127 795 aaKnown RBP17.58■□□□□ 0.4
MSH6-203ENST00000420813 THOP1P52888 689 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 RPL7AP62424 266 aaKnown RBP17.58■□□□□ 0.4
MSH6-203ENST00000420813 YPEL5P62699 121 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 SERINC3Q13530 473 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 TBC1D25Q3MII6 688 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 TPRG1LQ5T0D9 272 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 ACAD10Q6JQN1 1059 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 HCAR2Q8TDS4 363 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 HMCESQ96FZ2 354 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 VCPIP1Q96JH7 1222 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 CPEB1Q9BZB8 566 aaKnown RBP17.58■□□□□ 0.4
MSH6-203ENST00000420813 KLC2Q9H0B6 622 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 KLF15Q9UIH9 416 aa17.58■□□□□ 0.4
MSH6-203ENST00000420813 CREB3O43889 395 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 ITPKBP27987 946 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 IGFALSP35858 605 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 EIF2B5Q13144 721 aaKnown RBP17.57■□□□□ 0.4
MSH6-203ENST00000420813 GRM3Q14832 879 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 NCAPHQ15003 741 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 DCUN1D2Q6PH85 259 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 MCOLN2Q8IZK6 566 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 IFI44Q8TCB0 444 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 CXorf40AQ8TE69 158 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 CRELD1Q96HD1 420 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 BBC3Q96PG8 261 aaPredicted RBP17.57■□□□□ 0.4
MSH6-203ENST00000420813 HSD3B7Q9H2F3 369 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 SPASTQ9UBP0 616 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 MYO6Q9UM54 1294 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 PCDHB1Q9Y5F3 818 aa17.57■□□□□ 0.4
MSH6-203ENST00000420813 EIF3CLB5ME19 914 aaKnown RBP17.56■□□□□ 0.4
MSH6-203ENST00000420813 GOLGA6L22H0YM25 854 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 DXOO77932 396 aaKnown RBP17.56■□□□□ 0.4
MSH6-203ENST00000420813 MYF5P13349 255 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 TIMP2P16035 220 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 ELP6Q0PNE2 266 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 VPS36Q86VN1 386 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 DNAAF5Q86Y56 855 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 LSMEM2Q8N112 164 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 TP53I13Q8NBR0 393 aaPredicted RBP17.56■□□□□ 0.4
MSH6-203ENST00000420813 MAPK15Q8TD08 544 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 LMX1AQ8TE12 382 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 UBL7Q96S82 380 aaPredicted RBP17.56■□□□□ 0.4
MSH6-203ENST00000420813 EIF3CQ99613 913 aaKnown RBP17.56■□□□□ 0.4
MSH6-203ENST00000420813 IL12RB2Q99665 862 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 SYT11Q9BT88 431 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 ABCG4Q9H172 646 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 PRORYQ9H606 182 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 LRRC19Q9H756 370 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 PDFQ9HBH1 243 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 LHX3Q9UBR4 397 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 UBA2Q9UBT2 640 aaPredicted RBP17.56■□□□□ 0.4
MSH6-203ENST00000420813 APOBEC3BQ9UH17 382 aaKnown RBP17.56■□□□□ 0.4
MSH6-203ENST00000420813 KIF26BQ2KJY2 2108 aa17.56■□□□□ 0.4
MSH6-203ENST00000420813 SMG1Q96Q15 3661 aaKnown RBP17.55■□□□□ 0.4
MSH6-203ENST00000420813 TSPAN11A1L157 253 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 EME2A4GXA9 379 aaPredicted RBP17.55■□□□□ 0.4
MSH6-203ENST00000420813 MMP20O60882 483 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 CSO75390 466 aaKnown RBP17.55■□□□□ 0.4
MSH6-203ENST00000420813 NDST2P52849 883 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 TPI1P60174 286 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 OGDHQ02218 1023 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 CYTH1Q15438 398 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 DEFB133Q30KQ1 61 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 TMEM52BQ4KMG9 183 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 LRRC73Q5JTD7 316 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 MACC1Q6ZN28 852 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 IRF2BP2Q7Z5L9 587 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 PHACTR4Q8IZ21 702 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 TPCN2Q8NHX9 752 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 GLMNQ92990 594 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 GRAMD1AQ96CP6 724 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 ZNF578Q96N58 590 aaPredicted RBP17.55■□□□□ 0.4
MSH6-203ENST00000420813 NCAPGQ9BPX3 1015 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 BOCQ9BWV1 1114 aa17.55■□□□□ 0.4
MSH6-203ENST00000420813 LMO7DNF2Z398 122 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 INSIG1O15503 277 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 TNFAIP3P21580 790 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 XPAP23025 273 aaPredicted RBP17.54■□□□□ 0.4
MSH6-203ENST00000420813 LSSP48449 732 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 RPIAP49247 311 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 PEX5P50542 639 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 NR0B2Q15466 257 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 CDKN3Q16667 212 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 KLHL40Q2TBA0 621 aa17.54■□□□□ 0.4
MSH6-203ENST00000420813 PRRT3Q5FWE3 981 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms