RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 A6NNZ2 444 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 TMEM110-MUSTN1A8MSY1 372 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 INSIG1O15503 277 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 CBFA2T3O75081 653 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 TRIM16O95361 564 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 PAK4O96013 591 aaPredicted RBP12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 KRT7P08729 469 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 PYGBP11216 843 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 EPHA8P29322 1005 aaPredicted RBP12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 MAN1A1P33908 653 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 RENBPP51606 427 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 SUOXP51687 545 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 CLDN2P57739 230 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 ELP6Q0PNE2 266 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 LBRQ14739 615 aaKnown RBP12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 DBX2Q6ZNG2 339 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 SPATS2Q86XZ4 545 aaKnown RBP12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 GATAD2AQ86YP4 633 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 MAP7D3Q8IWC1 876 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 RHOT2Q8IXI1 618 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 BBS5Q8N3I7 341 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 KCTD6Q8NC69 237 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 OR13H1Q8NG92 308 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 FAM174AQ8TBP5 190 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 CXorf40AQ8TE69 158 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 ZNF641Q96N77 438 aaPredicted RBP12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 ZNF599Q96NL3 588 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 ETNK2Q9NVF9 386 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 KLHL11Q9NVR0 708 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 FTSJ1Q9UET6 329 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 SEPT3Q9UH03 358 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 APOBEC2Q9Y235 224 aaKnown RBP12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 BTBD3Q9Y2F9 522 aa12.87□□□□□ -0.35
HMGN1P4-201ENST00000419500 IGLON5A6NGN9 336 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 GOLGA8CPA6NN73 597 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 FPGTO14772 594 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 AREL1O15033 823 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 FTH1P19P0C7X4 201 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 CSNK1DP48730 415 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 AP1S1P61966 158 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 BCL2L1Q07817 233 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 TBX2Q13207 712 aaPredicted RBP12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 MESDQ14696 234 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 PDK2Q15119 407 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 ERAP2Q6P179 960 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 GCNT7Q6ZNI0 430 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 GLRX5Q86SX6 157 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 SRLQ86TD4 932 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 CAMK1DQ8IU85 385 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 TP53INP2Q8IXH6 220 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 BAHD1Q8TBE0 780 aaPredicted RBP12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 HCAR2Q8TDS4 363 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 RFFLQ8WZ73 363 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 TSC1Q92574 1164 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 VOPP1Q96AW1 172 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 CNTNAP3BQ96NU0 1288 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 PSKH2Q96QS6 385 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 ZNF670Q9BS34 389 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 WRAP53Q9BUR4 548 aaKnown RBP12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 C1QTNF7Q9BXJ2 289 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 CNTNAP3Q9BZ76 1288 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 SUV39H2Q9H5I1 410 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 SPEGQ15772 3267 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 CHD8Q9HCK8 2581 aa12.86□□□□□ -0.35
HMGN1P4-201ENST00000419500 SPINT1O43278 529 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 HYAL3O43820 417 aaPredicted RBP12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 MAFKO60675 156 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 TM7SF2O76062 418 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 CD48P09326 243 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 SPINK2P20155 84 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 HSPA9P38646 679 aaKnown RBP12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 ARHGAP25P42331 645 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 RGRP47804 291 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 RXRGP48443 463 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 SCNN1BP51168 640 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 NSUN2Q08J23 767 aaKnown RBP eCLIP12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 SLC10A7Q0GE19 358 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 DPYSL3Q14195 570 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 FGL2Q14314 439 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 UGP2Q16851 508 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 KYAT3Q6YP21 454 aaKnown RBP12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 Q6ZSR6 202 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 ABI3BPQ7Z7G0 1075 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 CPNE8Q86YQ8 564 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 DENND6BQ8NEG7 585 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 FAM71BQ8TC56 605 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 SAP25Q8TEE9 199 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 SCNM1Q9BWG6 230 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 C1QTNF2Q9BXJ5 285 aa12.85□□□□□ -0.35
HMGN1P4-201ENST00000419500 ASPMQ8IZT6 3477 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 AKAP13Q12802 2813 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 TSPAN11A1L157 253 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 MUSKO15146 869 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 RAD51BO15315 384 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 TNFSF14O43557 240 aa12.84□□□□□ -0.35
HMGN1P4-201ENST00000419500 MFSD11O43934 449 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms