RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 SLC1A5Q15758 541 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 CERCAMQ5T4B2 595 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 CERS6Q6ZMG9 384 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 USP45Q70EL2 814 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 C10orf67Q8IYJ2 551 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 CEP44Q9C0F1 390 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 KDM4CQ9H3R0 1056 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 MFSD1Q9H3U5 465 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 CATSPERZQ9NTU4 200 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.47□□□□□ -1.05
USP54-203ENST00000418501 FBXO5Q9UKT4 447 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 PLLPQ9Y342 182 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 TMEM114B3SHH9 223 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 CFAP99D6REC4 459 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 GOLGA8RI6L899 631 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 SOCS5O75159 536 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 VPS26AO75436 327 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 CNTN5O94779 1100 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 TGDSO95455 350 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 SERPINE1P05121 402 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 ERVK-10P10266 1014 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 GAD2Q05329 585 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 PDAP1Q13442 181 aaKnown RBP8.47□□□□□ -1.05
USP54-203ENST00000418501 ARHGEF7Q14155 803 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 FSCBQ5H9T9 825 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 EFL1Q7Z2Z2 1120 aaKnown RBP8.47□□□□□ -1.05
USP54-203ENST00000418501 CFAP52Q8N1V2 620 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 LPCAT1Q8NF37 534 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 ASB2Q96Q27 587 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 SFXN1Q9H9B4 322 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 RC3H2Q9HBD1 1191 aaKnown RBP8.47□□□□□ -1.05
USP54-203ENST00000418501 NMRAL1Q9HBL8 299 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 TDP1Q9NUW8 608 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 INTS10Q9NVR2 710 aaKnown RBP8.47□□□□□ -1.05
USP54-203ENST00000418501 THAP1Q9NVV9 213 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 PHTF1Q9UMS5 762 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 TRIM33Q9UPN9 1127 aa8.47□□□□□ -1.05
USP54-203ENST00000418501 A0A096LPK6 155 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 C2orf71A6NGG8 1288 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 LEFTY2O00292 366 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 KLF11O14901 512 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 CD68P34810 354 aaPredicted RBP8.46□□□□□ -1.05
USP54-203ENST00000418501 GRIA4P48058 902 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 RGS4P49798 205 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 DSC2Q02487 901 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 SLC10A7Q0GE19 358 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 ZNF470Q6ECI4 717 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 PCDH20Q8N6Y1 951 aaKnown RBP8.46□□□□□ -1.05
USP54-203ENST00000418501 OR7D4Q8NG98 312 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 SH3RF2Q8TEC5 729 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 HEXDCQ8WVB3 486 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 ZNF75CPQ92670 426 aaPredicted RBP8.46□□□□□ -1.05
USP54-203ENST00000418501 LRRC37BQ96QE4 947 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 MGME1Q9BQP7 344 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 ADAM33Q9BZ11 813 aa8.46□□□□□ -1.05
USP54-203ENST00000418501 CFAP73A6NFT4 308 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 ASMTLO95671 621 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 RALBP11234 206 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 CPA3P15088 417 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 DRD4P21917 467 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 RPA3P35244 121 aaPredicted RBP8.46□□□□□ -1.06
USP54-203ENST00000418501 SEC24CP53992 1094 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 MTM1Q13496 603 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 TXNDC8Q6A555 127 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 RANBP10Q6VN20 620 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 DSG4Q86SJ6 1040 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 FIBINQ8TAL6 211 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 AUTS2Q8WXX7 1259 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 RILPQ96NA2 401 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 C19orf43Q9BQ61 176 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 RASSF4Q9H2L5 321 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 SLC28A3Q9HAS3 691 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 GKN1Q9NS71 199 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 FGFR1OP2Q9NVK5 253 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.46□□□□□ -1.06
USP54-203ENST00000418501 FAM95CA0A1B0GW59 222 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.46□□□□□ -1.06
USP54-203ENST00000418501 CCT8L1PA6NM43 557 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 SYCE1LA8MT33 242 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 E5RI56 91 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 TP73O15350 636 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 EFEMP2O95967 443 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 SKIV2L2P42285 1042 aaKnown RBP8.46□□□□□ -1.06
USP54-203ENST00000418501 RAB10P61026 200 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 RPS24P62847 133 aaKnown RBP8.46□□□□□ -1.06
USP54-203ENST00000418501 NIPAL4Q0D2K0 466 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 ITGA9Q13797 1035 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 TTLL9Q3SXZ7 439 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 CES5AQ6NT32 575 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 KDELC2Q7Z4H8 507 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 CMTM8Q8IZV2 173 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 ARMC2Q8NEN0 867 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 SPATA22Q8NHS9 363 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 CCT6BQ92526 530 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 ULK4Q96C45 1275 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 MYO19Q96H55 970 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 BBS2Q9BXC9 721 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 DYRK4Q9NR20 520 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 HCSTQ9UBK5 93 aa8.46□□□□□ -1.06
USP54-203ENST00000418501 RAI2Q9Y5P3 530 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms