RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	RAB10	P61026	200 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	SNRPD1	P62314	119 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	VARS2	Q5ST30	1063 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	TRMT10B	Q6PF06	316 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	FAM151B	Q6UXP7	276 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	RNF145	Q96MT1	663 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	PANX3	Q96QZ0	392 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	HNRNPAB	Q99729	332 aa	Known RBP	13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	KCNK4	Q9NYG8	393 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	VWA7	Q9Y334	891 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	STARD13	Q9Y3M8	1113 aa		13.34	□□□□□ -0.27
BDNF-208	ENST00000418212	ALDH1A2	O94788	518 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	UNC5C	O95185	931 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	CHI3L1	P36222	383 aa	Predicted RBP	13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	FUT10	Q6P4F1	479 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	VSTM1	Q6UX27	236 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	USP45	Q70EL2	814 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	CENPL	Q8N0S6	344 aa	Predicted RBP	13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	ATG16L2	Q8NAA4	619 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	OR4K2	Q8NGD2	314 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	SELENOM	Q8WWX9	145 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	TBATA	Q96M53	351 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	WDR41	Q9HAD4	459 aa		13.33	□□□□□ -0.27
BDNF-208	ENST00000418212	XRN1	Q8IZH2	1706 aa	Known RBP	13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	PSMC3	P17980	439 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	CYP2A7	P20853	494 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	LPO	P22079	712 aa	Predicted RBP	13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	GRK3	P35626	688 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	DAOA	P59103	153 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	DSC2	Q02487	901 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	ACSM2A	Q08AH3	577 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	ACSM2B	Q68CK6	577 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	POTEH	Q6S545	545 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	ZNF621	Q6ZSS3	439 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	ZNF567	Q8N184	647 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	SPPL2A	Q8TCT8	520 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	AZIN2	Q96A70	460 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	CENPT	Q96BT3	561 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	SEMA6A	Q9H2E6	1030 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	CERS4	Q9HA82	394 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	VTI1B	Q9UEU0	232 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	FAM208A	Q9UK61	1670 aa	Known RBP	13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	HDAC3	O15379	428 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	ACADM	P11310	421 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	CACNA2D1	P54289	1103 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	SH3D19	Q5HYK7	790 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	CCDC149	Q6ZUS6	474 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	TMEM199	Q8N511	208 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	DNAJB14	Q8TBM8	379 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	FBXL18	Q96ME1	805 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	ACAT2	Q9BWD1	397 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	RMND5A	Q9H871	391 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	DTL	Q9NZJ0	730 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	LIMD1	Q9UGP4	676 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	TEKT2	Q9UIF3	430 aa		13.33	□□□□□ -0.28
BDNF-208	ENST00000418212	TLL1	O43897	1013 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	USP1	O94782	785 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	FECH	P22830	423 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	GFM2	Q969S9	779 aa	Known RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	BTN2A3P	Q96KV6	586 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	FBXO10	Q9UK96	956 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	CA12	O43570	354 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	PEX1	O43933	1283 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	EDF1	O60869	148 aa	Known RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	FKBP6	O75344	327 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	GSTM1	P09488	218 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	FGFR3	P22607	806 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	CORO1A	P31146	461 aa	Known RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	CCDC92	Q53HC0	331 aa	Predicted RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	RNF220	Q5VTB9	566 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	STK32C	Q86UX6	486 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	SLC44A1	Q8WWI5	657 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	ELMO1	Q92556	727 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	NFKBIZ	Q9BYH8	718 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	ATP13A3	Q9H7F0	1226 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	GRHL1	Q9NZI5	618 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	TMEM63A	O94886	807 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	LRPAP1	P30533	357 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	GRIA1	P42261	906 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	CHRNA4	P43681	627 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	GLIS1	Q8NBF1	620 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	HBEGF	Q99075	208 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	C1orf50	Q9BV19	199 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	PTPRJ	Q12913	1337 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	CCDC154	A6NI56	674 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212		M0R3G1	203 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	CAT	P04040	527 aa	Known RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	INHA	P05111	366 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	HGF	P14210	728 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	TKT	P29401	623 aa	Known RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	CLCN5	P51795	746 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	OASL	Q15646	514 aa	Known RBP	13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	ZNF618	Q5T7W0	954 aa		13.32	□□□□□ -0.28
BDNF-208	ENST00000418212	DHFR2	Q86XF0	187 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms