RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PTAR1Q7Z6K3 402 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 EXT2Q93063 718 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 EME1Q96AY2 570 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 IL12RB2Q99665 862 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TRPC7Q9HCX4 862 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CLIC5Q9NZA1 410 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CCDC167Q9P0B6 97 aa11.81□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SUPT7LO94864 414 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 LTA4HP09960 611 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PMLP29590 882 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 THPOP40225 353 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 AGKQ53H12 422 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PHC3Q8NDX5 983 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PPWD1Q96BP3 646 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SERPINB11Q96P15 392 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MTG1Q9BT17 334 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 EFHD1Q9BUP0 239 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ABI2Q9NYB9 513 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 E9PAM4 449 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TRPA1O75762 1119 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 IPO13O94829 963 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 AKR1A1P14550 325 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CLCN5P51795 746 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 YWHAHQ04917 246 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 FASTKQ14296 549 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CNSTQ6PJW8 725 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 AGMOQ6ZNB7 445 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC22A9Q8IVM8 553 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CNTN4Q8IWV2 1026 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CPSF7Q8N684 471 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PCDH20Q8N6Y1 951 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CNBD2Q96M20 576 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 FLRT1Q9NZU1 646 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 C15orf38-AP3S2A0A0A6YYH1 394 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC2A3P11169 496 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 DYNC1I2Q13409 638 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 IRF5Q13568 498 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CWF19L1Q69YN2 538 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RNF111Q6ZNA4 994 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ARPINQ7Z6K5 226 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ARHGAP12Q8IWW6 846 aa11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RTL3Q8N8U3 475 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TXNDC5Q8NBS9 432 aaKnown RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 C2CD4AQ8NCU7 369 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PCNTO95613 3336 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 GLTPD2A6NH11 291 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 STX16-NPEPL1H3BU86 382 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PSMD12O00232 456 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CASQ2O14958 399 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 KPNA6O60684 536 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CELF2O95319 508 aaKnown RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC4A1P02730 911 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 JUNP05412 331 aaKnown RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CD86P42081 329 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HSPA13P48723 471 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NUMBP49757 651 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RAB27AP51159 221 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PIGGQ5H8A4 983 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RAB44Q7Z6P3 723 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 KDM1BQ8NB78 822 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CASP10Q92851 521 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 NDUFA13Q9P0J0 144 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 Q9Y3F1 56 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RALGAPA2Q2PPJ7 1873 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 EME2A4GXA9 379 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 TRIM38O00635 465 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MAP3K13O43283 966 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CLPTM1O96005 669 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MAXP61244 160 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PSME3P61289 254 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MSLNQ13421 630 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 KIF19Q2TAC6 998 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 OGFRL1Q5TC84 451 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 GK5Q6ZS86 529 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 IFT43Q96FT9 208 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PTPN18Q99952 460 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SPATA16Q9BXB7 569 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SLC25A51Q9H1U9 297 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MRM3Q9HC36 420 aaKnown RBP11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PLXNB2O15031 1838 aa11.79□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 KCNU1A8MYU2 1149 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 PGM3O95394 542 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 MT-CO1P00395 513 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SBK3P0C264 359 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CD52P31358 61 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ARCN1P48444 511 aaKnown RBP11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RPL26P61254 145 aaKnown RBP11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CEACAM7Q14002 265 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ADGRE1Q14246 886 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 RPS6KA2Q15349 733 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ZNF423Q2M1K9 1284 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 LAYNQ6UX15 382 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 CUZD1Q86UP6 607 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 ADCY4Q8NFM4 1077 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 UPF3AQ9H1J1 476 aaKnown RBP11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 SMOC2Q9H3U7 446 aa11.78□□□□□ -0.52
CSPG4P3Y-201ENST00000418188 VWA7Q9Y334 891 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms