RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 EME2A4GXA9 379 aaPredicted RBP14.61□□□□□ -0.07
PAF1-202ENST00000416728 SIGLEC16A6NMB1 481 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 MMP20O60882 483 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 TGM2P21980 687 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 IGFALSP35858 605 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 RPIAP49247 311 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 YBEYP58557 167 aaPredicted RBP14.61□□□□□ -0.07
PAF1-202ENST00000416728 YPEL5P62699 121 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 CXADRP78310 365 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 NR0B2Q15466 257 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 ISXQ2M1V0 245 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 INO80DQ53TQ3 878 aaPredicted RBP14.61□□□□□ -0.07
PAF1-202ENST00000416728 PRRT3Q5FWE3 981 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 DNAJC24Q6P3W2 148 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 PHACTR4Q8IZ21 702 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 PYROXD2Q8N2H3 581 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 ANKRD20A12PQ8NF67 263 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 TPCN2Q8NHX9 752 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 GLMNQ92990 594 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 HMCESQ96FZ2 354 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 HIC2Q96JB3 615 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 EPAS1Q99814 870 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 SLC13A1Q9BZW2 595 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 NOL6Q9H6R4 1146 aaKnown RBP14.61□□□□□ -0.07
PAF1-202ENST00000416728 FANCLQ9NW38 375 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 MFHAS1Q9Y4C4 1052 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 MYLKQ15746 1914 aa14.61□□□□□ -0.07
PAF1-202ENST00000416728 TEX51A0A1B0GUA7 166 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 RASA4BC9J798 803 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 CCP110O43303 1012 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 RASA4O43374 803 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 CREB3O43889 395 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 LZTS3O60299 673 aaPredicted RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 PRB1P04280 392 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 XPAP23025 273 aaPredicted RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 ZNF143P52747 638 aaPredicted RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 COPB1P53618 953 aaKnown RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 ERVPABLB-1P60509 514 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 C1QBPQ07021 282 aaKnown RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 C19orf57Q0VDD7 668 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 C1orf61Q13536 156 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 PARP15Q460N3 678 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 FAXCQ5TGI0 409 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 BROXQ5VW32 411 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 MACC1Q6ZN28 852 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 MON1BQ7L1V2 547 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 NETO2Q8NC67 525 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 LSM14AQ8ND56 463 aaKnown RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 NAT6Q93015 286 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 TBATAQ96M53 351 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 MCEEQ96PE7 176 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 NCAPGQ9BPX3 1015 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 WRAP53Q9BUR4 548 aaKnown RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 LRRC61Q9BV99 259 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 TCEAL2Q9H3H9 227 aaPredicted RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 CATSPERBQ9H7T0 1116 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 THSD1Q9NS62 852 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 DKK3Q9UBP4 350 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 LGALS16A8MUM7 142 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 LMO7DNF2Z398 122 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 TOR1BO14657 336 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 MUSKO15146 869 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 GCATO75600 419 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 ANXA6P08133 673 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 TIMP2P16035 220 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 DESP17661 470 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 ITIH2P19823 946 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 EIF4A3P38919 411 aaKnown RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 AIF1P55008 147 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 ADKP55263 362 aaKnown RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 PPARDQ03181 441 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 ELP6Q0PNE2 266 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 SERINC3Q13530 473 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 KLHL40Q2TBA0 621 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 C3orf38Q5JPI3 329 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 C6orf132Q5T0Z8 1188 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 CRTC1Q6UUV9 634 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 RBM44Q6ZP01 1051 aaKnown RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 TP53I13Q8NBR0 393 aaPredicted RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 KCNE4Q8WWG9 221 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 GRAMD1AQ96CP6 724 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 EXOC2Q96KP1 924 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 BOCQ9BWV1 1114 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 KLC2Q9H0B6 622 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 MBNL1Q9NR56 388 aaKnown RBP14.6□□□□□ -0.07
PAF1-202ENST00000416728 FZD10Q9ULW2 581 aa14.6□□□□□ -0.07
PAF1-202ENST00000416728 PTPRQQ9UMZ3 2332 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 TCRBV5S1A1TA0A578 114 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 WASH4PA8MWX3 477 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 INSIG1O15503 277 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 FGF10O15520 208 aaPredicted RBP14.59□□□□□ -0.07
PAF1-202ENST00000416728 TCEA3O75764 348 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 PIGNO95427 931 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 RBMS1P29558 406 aaKnown RBP14.59□□□□□ -0.07
PAF1-202ENST00000416728 BLKP51451 505 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 SUOXP51687 545 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 UCNP55089 124 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 TMPRSS3P57727 454 aa14.59□□□□□ -0.07
PAF1-202ENST00000416728 RPL7AP62424 266 aaKnown RBP14.59□□□□□ -0.07
PAF1-202ENST00000416728 UBXN1Q04323 297 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms