RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ENTPD8Q5MY95 495 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ANKRD45Q5TZF3 282 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 FAM180BQ6P0A1 224 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZNF449Q6P9G9 518 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 LDHAL6AQ6ZMR3 332 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLC16A12Q6ZSM3 486 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 RSRC2Q7L4I2 434 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 GALNT5Q7Z7M9 940 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 TBC1D1Q86TI0 1168 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ITPRIPQ8IWB1 547 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 RPAP2Q8IXW5 612 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLC25A41Q8N5S1 370 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARL6IP6Q8N6S5 226 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ATG16L2Q8NAA4 619 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 KDM1BQ8NB78 822 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 STT3BQ8TCJ2 826 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 TBC1D31Q96DN5 1066 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 LTV1Q96GA3 475 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 TBATAQ96M53 351 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 PLEKHF1Q96S99 279 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 TMEM204Q9BSN7 226 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 CRB3Q9BUF7 120 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 AP1M1Q9BXS5 423 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 API5Q9BZZ5 524 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 RBM38Q9H0Z9 239 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ELAC1Q9H777 363 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 MRPL44Q9H9J2 332 aaKnown RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZNF304Q9HCX3 659 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 MRGBPQ9NV56 204 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 HIF1ANQ9NWT6 349 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 DACT1Q9NYF0 836 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 PLK2Q9NYY3 685 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 PCDHA7Q9UN72 937 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 MAGED1Q9Y5V3 778 aaPredicted RBP3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 IFT172Q9UG01 1749 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ABCA9Q8IUA7 1624 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ABCC1P33527 1531 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZFYVE9O95405 1425 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 SSH2Q76I76 1423 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 NSD3Q9BZ95 1437 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 ABCC4O15439 1325 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 EVC2Q86UK5 1308 aa3.94□□□□□ -1.78
HMGB3P23-201ENST00000414981 hCG_1642624A0A1W2PR95 340 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 TMEM247A6NEH6 219 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 H0YGN5 161 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 K7ENM7 598 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 TNFRSF13BO14836 293 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 TMCC2O75069 709 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 HEXIM1O94992 359 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 CAVIN2O95810 425 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 CBSLP0DN79 551 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 T-ENOLP0DO92 83 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 PRPH2P23942 346 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 SERPINA4P29622 427 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 CBSP35520 551 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 MLH1P40692 756 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 RAD52P43351 418 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZBTB16Q05516 673 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 CDK18Q07002 472 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLC20A2Q08357 652 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 CUL4AQ13619 759 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 ALKBH1Q13686 389 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 PKN2Q16513 984 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 GALNTL6Q49A17 601 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 GPATCH4Q5T3I0 446 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 UBAP2Q5T6F2 1119 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 RUSC1-AS1Q66K80 236 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 CAVIN1Q6NZI2 390 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 MTFR2Q6P444 385 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 SLC30A9Q6PML9 568 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 RASGRP2Q7LDG7 609 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 LCA5Q86VQ0 697 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 CAMK1DQ8IU85 385 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 BRSK2Q8IWQ3 736 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 IQCF1Q8N6M8 205 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 PTGR2Q8N8N7 351 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 POF1BQ8WVV4 589 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 ASB5Q8WWX0 329 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 TRAPPC9Q96Q05 1148 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZPBPQ9BS86 351 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 SF3B5Q9BWJ5 86 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 RANBP17Q9H2T7 1088 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 TSPY26PQ9H489 355 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 DCTPP1Q9H773 170 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZCCHC17Q9NP64 241 aaKnown RBP3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 ARL15Q9NXU5 204 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 FBXO4Q9UKT5 387 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 RABL2BQ9UNT1 228 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 GPR52Q9Y2T5 361 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 KIF3AQ9Y496 699 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 ATP6V1DQ9Y5K8 247 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 SNX5Q9Y5X3 404 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 KIF1BO60333 1816 aa3.93□□□□□ -1.78
HMGB3P23-201ENST00000414981 ADGRB3O60242 1522 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ZC3H13Q5T200 1668 aaKnown RBP3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 A0A1B0GVC2 190 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 SMTNL1A8MU46 457 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 GRM8O00222 908 aa3.92□□□□□ -1.78
HMGB3P23-201ENST00000414981 ACKR2O00590 384 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms