RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 NEDD8-MDP1E9PL57 170 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 GOLGA6L19H0YKK7 550 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 GOLGA8SH3BPF8 625 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 PAPSS1O43252 624 aaPredicted RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 AP1G1O43747 822 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 TSPAN3O60637 253 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 MAFKO60675 156 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 STC2O76061 302 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 NFATC1O95644 943 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 SERPINC1P01008 464 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 KLKB1P03952 638 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 ERBB2P04626 1255 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 FYNP06241 537 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 H2AFB1P0C5Y9 115 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 H2AFB2P0C5Z0 115 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 CHRNB1P11230 501 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 NCAM1P13591 858 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 PFKLP17858 780 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 ENPP1P22413 925 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 CORO1AP31146 461 aaKnown RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 KRT9P35527 623 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 OPRD1P41143 372 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 NUMBP49757 651 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 TUBP50607 506 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 GALK1P51570 392 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 PITX1P78337 314 aaPredicted RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 SRSF2Q01130 221 aaKnown RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 SATB1Q01826 763 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 GOLGA8FQ08AF8 430 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 GOLGA8DPQ0D2H9 430 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 BNIP3Q12983 259 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 MTAPQ13126 283 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 KIR3DS1Q14943 382 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 ANGPT1Q15389 498 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 STILQ15468 1287 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 PTPN20Q4JDL3 420 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 CT83Q5H943 113 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 EMC4Q5J8M3 183 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 RALGPS1Q5JS13 557 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 LY6G5CQ5SRR4 150 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 SYPL2Q5VXT5 272 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 IL31Q6EBC2 164 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 PM20D1Q6GTS8 502 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 OR6B2Q6IFH4 312 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 GALNT18Q6P9A2 607 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 RHBDF2Q6PJF5 856 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 CACNA2D4Q7Z3S7 1137 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 RALGPS2Q86X27 583 aaPredicted RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 TMEM25Q86YD3 366 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 DENND1CQ8IV53 801 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 ARHGAP18Q8N392 663 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 RNF139Q8WU17 664 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 CPA5Q8WXQ8 436 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 ATOH1Q92858 354 aaPredicted RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 CD101Q93033 1021 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 P2RY11Q96G91 374 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 PPP1R13BQ96KQ4 1090 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 FAM81BQ96LP2 452 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 SPAG5Q96R06 1193 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 P2RY13Q9BPV8 354 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 ANP32EQ9BTT0 268 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 STK33Q9BYT3 514 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 UBXN6Q9BZV1 441 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 SEMA4AQ9H3S1 761 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 SYNCQ9H7C4 482 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 C8orf33Q9H7E9 229 aaPredicted RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 TRPV5Q9NQA5 729 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 CNGB3Q9NQW8 809 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 ABCC13Q9NSE7 274 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 SEPT11Q9NVA2 429 aaKnown RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 CLIC5Q9NZA1 410 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 USP36Q9P275 1121 aaKnown RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 ACSL6Q9UKU0 697 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 GPR45Q9Y5Y3 372 aa5.06□□□□□ -1.6
VPS41-205ENST00000414632 MYO18AQ92614 2054 aaKnown RBP5.06□□□□□ -1.6
VPS41-205ENST00000414632 GOLGA6L7A0A1B0GV03 622 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 LRRC53A6NM62 1247 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 NOTOA8MTQ0 251 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 TMCO5BA8MYB1 307 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 SLC9A3R1O14745 358 aaPredicted RBP5.05□□□□□ -1.6
VPS41-205ENST00000414632 CAPN9O14815 690 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 MOCS2O96007 188 aaPredicted RBP5.05□□□□□ -1.6
VPS41-205ENST00000414632 CLEC2LP0C7M8 214 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 PRKCAP17252 672 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 CHRNB2P17787 502 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 AGXTP21549 392 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 STAT1P42224 750 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 PXNP49023 591 aaPredicted RBP5.05□□□□□ -1.6
VPS41-205ENST00000414632 RPL34P49207 117 aaKnown RBP5.05□□□□□ -1.6
VPS41-205ENST00000414632 FNTBP49356 437 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 SGSHP51688 502 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 RNASE9P60153 205 aaKnown RBP5.05□□□□□ -1.6
VPS41-205ENST00000414632 TPM4P67936 248 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 NHLH1Q02575 133 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 CSTF1Q05048 431 aaKnown RBP5.05□□□□□ -1.6
VPS41-205ENST00000414632 DMWDQ09019 674 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 GRSF1Q12849 480 aaKnown RBP eCLIP5.05□□□□□ -1.6
VPS41-205ENST00000414632 UGT8Q16880 541 aa5.05□□□□□ -1.6
VPS41-205ENST00000414632 FILIP1LQ4L180 1135 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms