RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 BMP10O95393 424 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 CCDC166P0CW27 439 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SMIM10L2AP0DMW4 78 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SMIM10L2BP0DMW5 78 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 TYMPP19971 482 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SERPINA4P29622 427 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 RPL9P32969 192 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 PLK1P53350 603 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SPIRE1Q08AE8 756 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 BNIP2Q12982 314 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 USP45Q70EL2 814 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 CDCA5Q96FF9 252 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 PGLYRP2Q96PD5 576 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 ZYG11BQ9C0D3 744 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SPAG4Q9NPE6 437 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 ZMYM5Q9UJ78 669 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 LEF1Q9UJU2 399 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 ZNF222Q9UK12 451 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 CD86P42081 329 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 GPR15P49685 360 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 MRPS6P82932 125 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 BOP1Q14137 746 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 PHKG1Q16816 387 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 C16orf62Q7Z3J2 963 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 C8orf59Q8N0T1 100 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SEMA4BQ9NPR2 832 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 TRPC4Q9UBN4 977 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 RNF225M0QZC1 329 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 HDAC3O15379 428 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 EPN2O95208 641 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 ITGAXP20702 1163 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 NAGLUP54802 743 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 PSME3P61289 254 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SLC25A3Q00325 362 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SKIV2LQ15477 1246 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 TSNQ15631 228 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 LYPLAL1Q5VWZ2 237 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 NEK10Q6ZWH5 1172 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 TRMT11Q7Z4G4 463 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 CDK20Q8IZL9 346 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 PTGR2Q8N8N7 351 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 RIBC2Q9H4K1 309 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 TCRBV9S1A1TA0A576 114 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 MATN2O00339 956 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 BANF1O75531 89 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 ATP5C1P36542 298 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 SRP54P61011 504 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 XIAPP98170 497 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 ZC3H12AQ5D1E8 599 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 TXNDC11Q6PKC3 985 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 PCDHB18PQ96TA0 734 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 STOML2Q9UJZ1 356 aa13.84□□□□□ -0.19
SMARCA4-202ENST00000413806 A0A1W2PRG6 482 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 GRK4P32298 578 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 MRPS5P82675 430 aaKnown RBP13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 TNK2Q07912 1038 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 DGCR6Q14129 220 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 PFKFB4Q16877 469 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 PAGE2BQ5JRK9 111 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 DENND5AQ6IQ26 1287 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 SYT12Q8IV01 421 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 FBXW8Q8N3Y1 598 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 PTCD3Q96EY7 689 aaKnown RBP13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 KREMEN1Q96MU8 473 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 PRDM12Q9H4Q4 367 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 SPG21Q9NZD8 308 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 ZNF221Q9UK13 617 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 PRPF19Q9UMS4 504 aaKnown RBP13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 SNX8Q9Y5X2 465 aa13.83□□□□□ -0.19
SMARCA4-202ENST00000413806 PLSCR1O15162 318 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 DARSP14868 501 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 GOT1P17174 413 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 TTPAP49638 278 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 SCNN1GP51170 649 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 JAM2P57087 298 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 CRADDP78560 199 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 PTP4A2Q12974 167 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 PCDH20Q8N6Y1 951 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 ST6GALNAC4Q9H4F1 302 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 SYNDIG1Q9H7V2 258 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 FBXO6Q9NRD1 293 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 ARHGAP28Q9P2N2 729 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 NFKBIL1Q9UBC1 381 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 WBP11Q9Y2W2 641 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 SLC15A5A6NIM6 579 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 ENPEPQ07075 957 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 ZNF544Q6NX49 715 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 CACTIN-AS1Q8N1I8 211 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 ADAM2Q99965 735 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 SNX6Q9UNH7 406 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 S100A6P06703 90 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 ANXA5P08758 320 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 ATF4P18848 351 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 SP100P23497 879 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 USP46P62068 366 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 BLMHQ13867 455 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 SPIDRQ14159 915 aa13.83□□□□□ -0.2
SMARCA4-202ENST00000413806 NOMO1Q15155 1222 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms