RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 CARD16Q5EG05 197 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 EFHC1Q5JVL4 640 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 BRMS1LQ5PSV4 323 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 ISM2Q6H9L7 571 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 CLEC18BQ6UXF7 455 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 SLC26A9Q7LBE3 791 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 VPS36Q86VN1 386 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 ZFAND4Q86XD8 727 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 DTX1Q86Y01 620 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 FSTL5Q8N475 847 aaPredicted RBP9.7□□□□□ -0.86
RFFL-203ENST00000413582 WDTC1Q8N5D0 677 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 CLEC18CQ8NCF0 446 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 RAB7BQ96AH8 199 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 TMEM74Q96NL1 305 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 BPIFA3Q9BQP9 254 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 TM6SF2Q9BZW4 377 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 INTS2Q9H0H0 1204 aaKnown RBP9.7□□□□□ -0.86
RFFL-203ENST00000413582 TKTL2Q9H0I9 626 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 EPN3Q9H201 632 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 ZDHHC6Q9H6R6 413 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 MPP6Q9NZW5 540 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 SEPT10Q9P0V9 454 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 GULP1Q9UBP9 304 aa9.7□□□□□ -0.86
RFFL-203ENST00000413582 FCF1Q9Y324 198 aaKnown RBP9.7□□□□□ -0.86
RFFL-203ENST00000413582 ILVBLA1L0T0 632 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 C16orf96A6NNT2 1141 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ANKRD36A6QL64 1941 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 NEMP1O14524 444 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 AREL1O15033 823 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 CD160O95971 181 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ERBB2P04626 1255 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 CR2P20023 1033 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 OR1E1P30953 314 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 GKP32189 559 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 NOS2P35228 1153 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 CXCR3P49682 368 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 DNA2P51530 1060 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 YPEL5P62699 121 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ZFP36L1Q07352 338 aaKnown RBP9.69□□□□□ -0.86
RFFL-203ENST00000413582 TCEA2Q15560 299 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 CCDC40Q4G0X9 1142 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ZNF805Q5CZA5 627 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 FAXCQ5TGI0 409 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 RETSATQ6NUM9 610 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 LVRNQ6Q4G3 990 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ZNF783Q6ZMS7 281 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 C11orf57Q6ZUT1 292 aaPredicted RBP9.69□□□□□ -0.86
RFFL-203ENST00000413582 CCNJLQ8IV13 435 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 PASD1Q8IV76 773 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 RP1L1Q8IWN7 2480 aaPredicted RBP9.69□□□□□ -0.86
RFFL-203ENST00000413582 ZSCAN1Q8NBB4 408 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 TP53I13Q8NBR0 393 aaPredicted RBP9.69□□□□□ -0.86
RFFL-203ENST00000413582 EHBP1Q8NDI1 1231 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 OR6K2Q8NGY2 324 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ZNF564Q8TBZ8 553 aaPredicted RBP9.69□□□□□ -0.86
RFFL-203ENST00000413582 CREBBPQ92793 2442 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 CEP63Q96MT8 703 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 NPY6RQ99463 290 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 SPON2Q9BUD6 331 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ADNPQ9H2P0 1102 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 LRRN3Q9H3W5 708 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ATP13A1Q9HD20 1204 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 MBNL1Q9NR56 388 aaKnown RBP9.69□□□□□ -0.86
RFFL-203ENST00000413582 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 SEPT3Q9UH03 358 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 DOLKQ9UPQ8 538 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 ACTL7AQ9Y615 435 aa9.69□□□□□ -0.86
RFFL-203ENST00000413582 A0A1W2PQC6 194 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 BECN2A8MW95 431 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 PPP1R3GB7ZBB8 358 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 C9orf172C9J069 976 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.68□□□□□ -0.86
RFFL-203ENST00000413582 AGRPO00253 132 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 TOR1BO14657 336 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 ALPIP09923 528 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 CD82P27701 267 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 ERCC5P28715 1186 aaPredicted RBP9.68□□□□□ -0.86
RFFL-203ENST00000413582 EIF4A3P38919 411 aaKnown RBP9.68□□□□□ -0.86
RFFL-203ENST00000413582 HK3P52790 923 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 FOXK1P85037 733 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 SLC20A2Q08357 652 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 IRF4Q15306 451 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 ELOCQ15369 112 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 SKIDA1Q1XH10 827 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 ALG11Q2TAA5 492 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 PTPN20Q4JDL3 420 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 LRRC73Q5JTD7 316 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 FOXR2Q6PJQ5 311 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 SLITRK4Q8IW52 837 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 PLPP6Q8IY26 295 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 C1orf131Q8NDD1 294 aaKnown RBP9.68□□□□□ -0.86
RFFL-203ENST00000413582 ZNF397Q8NF99 534 aaPredicted RBP9.68□□□□□ -0.86
RFFL-203ENST00000413582 USP7Q93009 1102 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 ISG20Q96AZ6 181 aaKnown RBP9.68□□□□□ -0.86
RFFL-203ENST00000413582 TMEM159Q96B96 161 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 ARHGEF26Q96DR7 871 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 EPAS1Q99814 870 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 EDEM3Q9BZQ6 932 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 WDCPQ9H6R7 721 aa9.68□□□□□ -0.86
RFFL-203ENST00000413582 UBE2TQ9NPD8 197 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms