RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 FOXL2P58012 376 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ID2Q02363 134 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 NEXNQ0ZGT2 675 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 GALNT2Q10471 571 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PRKG2Q13237 762 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 DCAF6Q58WW2 860 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 MZT2BQ6NZ67 158 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 TMEM154Q6P9G4 183 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 INO80CQ6PI98 192 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SLC22A25Q6T423 547 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 KLHL24Q6TFL4 600 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ATF7IPQ6VMQ6 1270 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 UBE2Q1Q7Z7E8 422 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CAMK1DQ8IU85 385 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 BRSK2Q8IWQ3 736 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ADGRF3Q8IZF5 1079 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 VPS52Q8N1B4 723 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SMRP1Q8NCR6 262 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SEMA6DQ8NFY4 1073 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 LINS1Q8NG48 757 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 NEK9Q8TD19 979 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 HSPH1Q92598 858 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 RILPL2Q969X0 211 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ZUFSPQ96AP4 578 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 KLHL29Q96CT2 875 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 FCRL5Q96RD9 977 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PAIP1Q9H074 479 aaKnown RBP2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 OSBPL5Q9H0X9 879 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 EPHX3Q9H6B9 360 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SYNCQ9H7C4 482 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PRKRIP1Q9H875 184 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ACTR5Q9H9F9 607 aaPredicted RBP2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 NSMCE4AQ9NXX6 385 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 MTMR4Q9NYA4 1195 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 WWOXQ9NZC7 414 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 PNMA2Q9UL42 364 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 DTX4Q9Y2E6 619 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CYP46A1Q9Y6A2 500 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 SCINQ9Y6U3 715 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 CASZ1Q86V15 1759 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 ALS2Q96Q42 1657 aa2.78□□□□□ -1.96
RNU6-1140P-201ENST00000410517 MYO5BQ9ULV0 1848 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KIF24Q5T7B8 1368 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF521Q96K83 1311 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PCDH11XQ9BZA7 1347 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PCDH11YQ9BZA8 1340 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CENPJQ9HC77 1338 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TEX13CA0A0J9YWL9 993 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 C17orf113A0A1B0GUU1 675 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 C17orf102A2RUQ5 167 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GAGE12JA6NER3 117 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NPIPB13A6NJU9 1138 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LRRC53A6NM62 1247 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NPIPB5A8MRT5 1133 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EIF3CLB5ME19 914 aaKnown RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TEX22C9J3V5 150 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NPIPB4C9JG80 1138 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EYA2O00167 538 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TNPO2O14787 897 aaKnown RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TP73O15350 636 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RNMTO43148 476 aaKnown RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TIPRLO75663 272 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CBX6O95503 412 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MBPP02686 304 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ACADMP11310 421 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CYP2A6P11509 494 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CD58P19256 250 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TNFAIP3P21580 790 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SFPQP23246 707 aaKnown RBP eCLIP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PRPH2P23942 346 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ABCD1P33897 745 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF84P51523 738 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CCR9P51686 369 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MVDP53602 400 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM3BP58499 235 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RPL7AP62424 266 aaKnown RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PRAMEP78395 509 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MPP1Q00013 466 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC14A1Q13336 389 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MAMLD1Q13495 774 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 STIM1Q13586 685 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 IL13RA2Q14627 380 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CCNG2Q16589 344 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GSTA3Q16772 222 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HIST2H2ACQ16777 129 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PROSER3Q2NL68 480 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PLK5Q496M5 336 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF766Q5HY98 468 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM69AQ5T7M9 428 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC30A9Q6PML9 568 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF474Q6S9Z5 364 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF793Q6ZN11 406 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAM57BQ71RH2 274 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TRAPPC11Q7Z392 1133 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CPLX4Q7Z7G2 160 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TADA2BQ86TJ2 420 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HEATR4Q86WZ0 1026 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RHPN2Q8IUC4 686 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SUGP1Q8IWZ8 645 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms