RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 TP73O15350 636 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 AKAP8O43823 692 aaKnown RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 TBCAO75347 108 aaKnown RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 ERAL1O75616 437 aaKnown RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 GJB3O75712 270 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 BEST1O76090 585 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 TMCC1O94876 653 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 EDN2P20800 178 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 ATP5F1P24539 256 aaPredicted RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 MPGP29372 298 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 ACSL1P33121 698 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 CTCFP49711 727 aaPredicted RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 MMP14P50281 582 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 RARSP54136 660 aaKnown RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 EIF3BP55884 814 aaKnown RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 WASHC5Q12768 1159 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 EDRF1Q3B7T1 1238 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 KRTAP15-1Q3LI76 137 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 MIDNQ504T8 468 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 ENTPD8Q5MY95 495 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 GPR139Q6DWJ6 353 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 ISM2Q6H9L7 571 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 AAGABQ6PD74 315 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 IQCA1Q86XH1 822 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 ADGRG3Q86Y34 549 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 TTC39CQ8N584 583 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 ARL10Q8N8L6 244 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 MSANTD4Q8NCY6 345 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 CMASQ8NFW8 434 aaPredicted RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 OR4N2Q8NGD1 307 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 EME1Q96AY2 570 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 GLIS2Q9BZE0 524 aaPredicted RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 OR10A4Q9H209 315 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 MUC13Q9H3R2 512 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 AAMDCQ9H7C9 122 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 CCDC177Q9NQR7 707 aaPredicted RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 PAPOLBQ9NRJ5 636 aaKnown RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 BABAM1Q9NWV8 329 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 CHORDC1Q9UHD1 332 aaPredicted RBP5.39□□□□□ -1.55
LSM5-206ENST00000409987 LYVE1Q9Y5Y7 322 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 COX11Q9Y6N1 276 aa5.39□□□□□ -1.55
LSM5-206ENST00000409987 TRBV5-3A0A0A0MS03 114 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 KIR2DS5A0A0G2JLQ3 304 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 SMIM35A0A1B0GVV1 85 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.38□□□□□ -1.55
LSM5-206ENST00000409987 FAM157AC9JC47 383 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 PTGES3LE9PB15 166 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 KIR2DS3K7RE56 304 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 PPP6CO00743 305 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 BCAR3O75815 825 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 SEC14L2O76054 403 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 SPARCP09486 303 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 BSGP35613 385 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 DPP6P42658 865 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 TNNT3P45378 269 aaPredicted RBP5.38□□□□□ -1.55
LSM5-206ENST00000409987 CPA2P48052 419 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 CLCNKBP51801 687 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 RPL7AP62424 266 aaKnown RBP5.38□□□□□ -1.55
LSM5-206ENST00000409987 GHRHRQ02643 423 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 SLC18A2Q05940 514 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 LRMPQ12912 555 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 STK4Q13043 487 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 PPP2R5CQ13362 524 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 ALG10Q5BKT4 473 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 ALG10BQ5I7T1 473 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 TTC39AQ5SRH9 613 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 LRCH2Q5VUJ6 765 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 PLBD1Q6P4A8 553 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 SLC46A3Q7Z3Q1 461 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 GPAT4Q86UL3 456 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 IGFN1Q86VF2 1251 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 TAGAPQ8N103 731 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 CADM4Q8NFZ8 388 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 TMEM170AQ8WVE7 144 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 ZNF419Q96HQ0 510 aaPredicted RBP5.38□□□□□ -1.55
LSM5-206ENST00000409987 JAKMIP1Q96N16 626 aaKnown RBP5.38□□□□□ -1.55
LSM5-206ENST00000409987 QTRT1Q9BXR0 403 aaKnown RBP5.38□□□□□ -1.55
LSM5-206ENST00000409987 EDEM3Q9BZQ6 932 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 GRPEL1Q9HAV7 217 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 ADARB2Q9NS39 739 aaKnown RBP5.38□□□□□ -1.55
LSM5-206ENST00000409987 TMEM45AQ9NWC5 275 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 CTNNAL1Q9UBT7 734 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 PLEKHB1Q9UF11 243 aaPredicted RBP5.38□□□□□ -1.55
LSM5-206ENST00000409987 CDH22Q9UJ99 828 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 PCDHGB5Q9Y5G0 923 aa5.38□□□□□ -1.55
LSM5-206ENST00000409987 DDTLA6NHG4 134 aaPredicted RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 F8W810 466 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 RBMXL2O75526 392 aaKnown RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 SEC31AO94979 1220 aaKnown RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 CCNDBP1O95273 360 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 PTMAP06454 111 aaKnown RBP5.37□□□□□ -1.55
LSM5-206ENST00000409987 HEXAP06865 529 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 CTSAP10619 480 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 SCG2P13521 617 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 ATP6V1B1P15313 513 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 PSMA3P25788 255 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 YWHAQP27348 245 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 CERS1P27544 350 aa5.37□□□□□ -1.55
LSM5-206ENST00000409987 TM4SF1P30408 202 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms