RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SETMARQ53H47 684 aaPredicted RBP31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 LRRC73Q5JTD7 316 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 KATNAL2Q8IYT4 538 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MINDY1Q8N5J2 469 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 OR2I1PQ8NGU4 316 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 KRT35Q92764 455 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SERAC1Q96JX3 654 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MGME1Q9BQP7 344 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ZDHHC5Q9C0B5 715 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SUV39H2Q9H5I1 410 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 GGT7Q9UJ14 662 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ITM2BQ9Y287 266 aa31.51■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CNOT1A5YKK6 2376 aaKnown RBP31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TSPAN11A1L157 253 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 APOL1O14791 398 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 WNT9AO14904 365 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MX2P20592 715 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MMP13P45452 471 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SCNN1BP51168 640 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ZNF284Q2VY69 593 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TMEM259Q4ZIN3 620 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MARC1Q5VT66 337 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SEL1L3Q68CR1 1132 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 NAPEPLDQ6IQ20 393 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 RFX6Q8HWS3 928 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CAMK1DQ8IU85 385 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 BBS5Q8N3I7 341 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TXLNBQ8N3L3 684 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 HDAC11Q96DB2 347 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 NSMCE3Q96MG7 304 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ZNF641Q96N77 438 aaPredicted RBP31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TSGA13Q96PP4 275 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MAK16Q9BXY0 300 aaKnown RBP31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ATP13A3Q9H7F0 1226 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 DMTF1Q9Y222 760 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CABIN1Q9Y6J0 2220 aa31.5■■■□□ 2.63
TRAF3IP1-203ENST00000409739 GRID2IPA4D2P6 1211 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 AREL1O15033 823 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CR2P20023 1033 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 AP1S1P61966 158 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 KIAA1161Q6NSJ0 714 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TIGD7Q6NT04 549 aaPredicted RBP31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SPOCD1Q6ZMY3 1216 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TEX26Q8N6G2 289 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 LRRC57Q8N9N7 239 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 LRRN4Q8WUT4 740 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MAML1Q92585 1016 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 KLK6Q92876 244 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 FATE1Q969F0 183 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ZNF830Q96NB3 372 aaPredicted RBP31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 AASDHPPTQ9NRN7 309 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 HEY1Q9Y5J3 304 aa31.49■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TIMP2P16035 220 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 PRLRP16471 622 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CCNCP24863 283 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SERPINA4P29622 427 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MAXP61244 160 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 KIF5AQ12840 1032 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 HNRNPDQ14103 355 aaKnown RBP31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ADAT2Q7Z6V5 191 aaKnown RBP31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TTC7BQ86TV6 843 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CCDC112Q8NEF3 446 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 HCAR2Q8TDS4 363 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ANKRD6Q9Y2G4 727 aa31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SBDSQ9Y3A5 250 aaKnown RBP eCLIP31.48■■■□□ 2.63
TRAF3IP1-203ENST00000409739 A0A1W2PR77 199 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MACROD2A1Z1Q3 448 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TTC24A2A3L6 582 aaPredicted RBP31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 MATN3O15232 486 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TSPAN6O43657 245 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 WNT1P04628 370 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ZFXP17010 805 aaPredicted RBP31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CD38P28907 300 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CTNNA1P35221 906 aaKnown RBP31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 DYNLT1P63172 113 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 RPS21P63220 83 aaKnown RBP31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 KIF19Q2TAC6 998 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 NPNTQ6UXI9 565 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ZSWIM9Q86XI8 627 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 NUDCD1Q96RS6 583 aa31.47■■■□□ 2.63
TRAF3IP1-203ENST00000409739 NEMP1O14524 444 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 TM4SF5O14894 197 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 VILLO15195 856 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SLC31A1O15431 190 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 BCL2L1Q07817 233 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 UAP1L1Q3KQV9 507 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 CFAP58Q5T655 872 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 BRAT1Q6PJG6 821 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 EXD1Q8NHP7 514 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 KIAA1524Q8TCG1 905 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ECHDC3Q96DC8 303 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 FEM1CQ96JP0 617 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 OLFM3Q96PB7 478 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 NT5MQ9NPB1 228 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SCUBE2Q9NQ36 999 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 DNAAF2Q9NVR5 837 aaKnown RBP31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 SNX11Q9Y5W9 270 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 ADGRG1Q9Y653 693 aa31.46■■■□□ 2.63
TRAF3IP1-203ENST00000409739 GOLGA6L3A6NEY3 463 aa31.45■■■□□ 2.63
TRAF3IP1-203ENST00000409739 UPK3BL1B0FP48 263 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms