RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FIZ1Q96SL8 496 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 SLC25A33Q9BSK2 321 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 PHF7Q9BWX1 381 aaPredicted RBP4.28□□□□□ -1.72
PMS1-203ENST00000409593 NUF2Q9BZD4 464 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 IL1RAPL1Q9NZN1 696 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 PEMTQ9UBM1 199 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 CTNNAL1Q9UBT7 734 aa4.28□□□□□ -1.72
PMS1-203ENST00000409593 AGO1Q9UL18 857 aaKnown RBP4.28□□□□□ -1.72
PMS1-203ENST00000409593 ZBTB11O95625 1053 aaPredicted RBP4.27□□□□□ -1.73
PMS1-203ENST00000409593 HSD3B1P14060 373 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 ZNF8P17098 575 aaPredicted RBP4.27□□□□□ -1.73
PMS1-203ENST00000409593 CCT5P48643 541 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 ADORA2A-AS1P86434 159 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 BNC1Q01954 994 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 CHRNDQ07001 517 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 TRAF3Q13114 568 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 DHX8Q14562 1220 aaKnown RBP4.27□□□□□ -1.73
PMS1-203ENST00000409593 ZNF667Q5HYK9 610 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 EFHC1Q5JVL4 640 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 C17orf99Q6UX52 265 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 RBM23Q86U06 439 aaKnown RBP4.27□□□□□ -1.73
PMS1-203ENST00000409593 FAM160B2Q86V87 743 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 ADGRF5Q8IZF2 1346 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 SMRP1Q8NCR6 262 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 ARRDC2Q8TBH0 407 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 TRIB2Q92519 343 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 OTULINQ96BN8 352 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 FAM84BQ96KN1 310 aaPredicted RBP4.27□□□□□ -1.73
PMS1-203ENST00000409593 UBXN10Q96LJ8 280 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 BABAM1Q9NWV8 329 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 NDRG3Q9UGV2 375 aa4.27□□□□□ -1.73
PMS1-203ENST00000409593 CBY3A6NI87 242 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 HSPB2A8KAH6 182 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 PRSS44E7EML9 344 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 RGS11O94810 467 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 CH25HO95992 272 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 ZNF12P17014 697 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 POU1F1P28069 291 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 CCR5P51681 352 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 SEC61A1P61619 476 aaKnown RBP4.26□□□□□ -1.73
PMS1-203ENST00000409593 ST3GAL1Q11201 340 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 ARHGEF6Q15052 776 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 HSPB2Q16082 182 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 C18orf65Q6ZTR6 163 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 TBC1D26Q86UD7 250 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 SFTPA2Q8IWL1 248 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 KIAA2013Q8IYS2 634 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 TNIP2Q8NFZ5 429 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 LMO3Q8TAP4 145 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 NOC3LQ8WTT2 800 aaKnown RBP4.26□□□□□ -1.73
PMS1-203ENST00000409593 RTP4Q96DX8 246 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 ELP4Q96EB1 424 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 LMLNQ96KR4 655 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 RRN3Q9NYV6 651 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 CNOT7Q9UIV1 285 aaKnown RBP4.26□□□□□ -1.73
PMS1-203ENST00000409593 PLSCR5A0PG75 271 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 PCNAP12004 261 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 SRD5A1P18405 259 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 RYKP34925 604 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 GPD2P43304 727 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.26□□□□□ -1.73
PMS1-203ENST00000409593 DDR1Q08345 913 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 KIF5AQ12840 1032 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 SLC39A14Q15043 492 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 ESCO2Q56NI9 601 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 KLHL24Q6TFL4 600 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 PRSS57Q6UWY2 283 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 H1FNTQ75WM6 255 aaPredicted RBP4.26□□□□□ -1.73
PMS1-203ENST00000409593 LRRC8DQ7L1W4 858 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 GPAT4Q86UL3 456 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 PARP16Q8N5Y8 322 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 AADATQ8N5Z0 425 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 RBMXL3Q8N7X1 1067 aaKnown RBP4.26□□□□□ -1.73
PMS1-203ENST00000409593 GJC3Q8NFK1 279 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 GPR63Q9BZJ6 419 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 CYSLTR2Q9NS75 346 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 SNTG1Q9NSN8 517 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 LUZP4Q9P127 313 aa4.26□□□□□ -1.73
PMS1-203ENST00000409593 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 PRR23D1E9PI22 279 aaPredicted RBP4.25□□□□□ -1.73
PMS1-203ENST00000409593 J3KR12 359 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 GUCY1B2O75343 617 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 VNN2O95498 520 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 POLBP06746 335 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 IFIT1P09914 478 aaKnown RBP4.25□□□□□ -1.73
PMS1-203ENST00000409593 PRR23D2P0DMB1 279 aaPredicted RBP4.25□□□□□ -1.73
PMS1-203ENST00000409593 PTPN2P17706 415 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 EDN2P20800 178 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 PSMC2P35998 433 aaKnown RBP4.25□□□□□ -1.73
PMS1-203ENST00000409593 PIGAP37287 484 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 MAPK9P45984 424 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 EFNB1P98172 346 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 VEPH1Q14D04 833 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 ZRSR2Q15696 482 aaKnown RBP4.25□□□□□ -1.73
PMS1-203ENST00000409593 SERTAD4-AS1Q5TG53 156 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 C9orf57Q5W0N0 161 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 CYP26C1Q6V0L0 522 aa4.25□□□□□ -1.73
PMS1-203ENST00000409593 SHFQ7M4L6 423 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms