RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SUV39H2Q9H5I1 410 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 USP29Q9HBJ7 922 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 GPR27Q9NS67 375 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 NCKIPSDQ9NZQ3 722 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 DKK4Q9UBT3 224 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 IP6K2Q9UHH9 426 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 ZMIZ1Q9ULJ6 1067 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 ACTL7AQ9Y615 435 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 CSNK1G3Q9Y6M4 447 aa14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 MAP1BP46821 2468 aaKnown RBP14.72□□□□□ -0.05
NIF3L1-205ENST00000409588 CACNA1BQ00975 2339 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 SPTY2D1-AS1A0A0U1RR47 76 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 A0A1W2PQ67 120 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 CFAP69A5D8W1 941 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 IGLON5A6NGN9 336 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 TMEM110-MUSTN1A8MSY1 372 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 RNF103O00237 685 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 LRCH4O75427 683 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 RFPL3O75679 317 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 PALMO75781 387 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 TM7SF2O76062 418 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 ERCC2P18074 760 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 XPAP23025 273 aaPredicted RBP14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 DGKAP23743 735 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 HNF1BP35680 557 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 ARL4AP40617 200 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 PAPOLAP51003 745 aaKnown RBP14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 IL10RBQ08334 325 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 CYTH1Q15438 398 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 DPYSL2Q16555 572 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 E4F1Q66K89 784 aaPredicted RBP14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 NIPA2Q8N8Q9 360 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 BTN2A2Q8WVV5 523 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 TEKT4Q8WW24 435 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 KLK6Q92876 244 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 CENPTQ96BT3 561 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 SNRNP25Q9BV90 132 aaKnown RBP14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 CALN1Q9BXU9 219 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 SLC39A8Q9C0K1 460 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 PDFQ9HBH1 243 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 MYO1AQ9UBC5 1043 aa14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 IPO11Q9UI26 975 aaKnown RBP14.71□□□□□ -0.05
NIF3L1-205ENST00000409588 FRYQ5TBA9 3013 aa14.71□□□□□ -0.06
NIF3L1-205ENST00000409588 TMEM131Q92545 1883 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 H3BM21 787 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 H3BRJ5 948 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 MYO1FO00160 1098 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 CBFA2T2O43439 604 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 CSF2P04141 144 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 CAPNS1P04632 268 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 TIMP2P16035 220 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 ACP1P24666 158 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 NFKBIAP25963 317 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 HNRNPH3P31942 346 aaKnown RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 PEX5P50542 639 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 DUSP3P51452 185 aaPredicted RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 AGERQ15109 404 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 UGP2Q16851 508 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 ZSCAN23Q3MJ62 389 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 TMEM52BQ4KMG9 183 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 PPP6R3Q5H9R7 873 aaPredicted RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 ATXN7L2Q5T6C5 722 aaPredicted RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 ERAP2Q6P179 960 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 ALKBH5Q6P6C2 394 aaKnown RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 LEKR1Q6ZMV7 388 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 GCNT7Q6ZNI0 430 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 SLC25A45Q8N413 288 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 FAM181AQ8N9Y4 354 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 OR13H1Q8NG92 308 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 OR6K2Q8NGY2 324 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 OR4C6Q8NH72 309 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 CXorf40AQ8TE69 158 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 ZCCHC14Q8WYQ9 949 aaKnown RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 VOPP1Q96AW1 172 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 KLF6Q99612 283 aaPredicted RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 KLC2Q9H0B6 622 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 CCDC86Q9H6F5 360 aaKnown RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 ATP13A3Q9H7F0 1226 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 NLGN3Q9NZ94 848 aa14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 CWC15Q9P013 229 aaKnown RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 RCOR3Q9P2K3 495 aaPredicted RBP14.7□□□□□ -0.06
NIF3L1-205ENST00000409588 TSPAN11A1L157 253 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 GOLGA8CPA6NN73 597 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 J3KR12 359 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 SCAMP1O15126 338 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 CYP1A2P05177 515 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 SERPINA4P29622 427 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 GKP32189 559 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 SERPINB6P35237 376 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 HSPA9P38646 679 aaKnown RBP14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 CLDN2P57739 230 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 PFN3P60673 137 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 DPYSQ14117 519 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 TRIM14Q14142 442 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 FGL2Q14314 439 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 NFKBIBQ15653 356 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 CA9Q16790 459 aa14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 HADHQ16836 314 aaKnown RBP14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 TSR1Q2NL82 804 aaKnown RBP14.69□□□□□ -0.06
NIF3L1-205ENST00000409588 RALGPS1Q5JS13 557 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms