RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SETD3Q86TU7 594 aaPredicted RBP20.88■□□□□ 0.93
USP39-203ENST00000409470 MGME1Q9BQP7 344 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 MUC3BQ9H195 1237 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 TASP1Q9H6P5 420 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 TRIM33Q9UPN9 1127 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 CHD5Q8TDI0 1954 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 ITM2AO43736 263 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 LYPLA1O75608 230 aaPredicted RBP20.88■□□□□ 0.93
USP39-203ENST00000409470 BAIAP3O94812 1187 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 FGF1P05230 155 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 NQO1P15559 274 aaKnown RBP20.88■□□□□ 0.93
USP39-203ENST00000409470 CREMQ03060 361 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 SLC12A1Q13621 1099 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 GALNT3Q14435 633 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 KIAA0408Q6ZU52 694 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 KIF2BQ8N4N8 673 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 GPATCH11Q8N954 259 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 OR13J1Q8NGT2 312 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 SREK1Q8WXA9 508 aaKnown RBP20.88■□□□□ 0.93
USP39-203ENST00000409470 ELMO2Q96JJ3 720 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 MAFFQ9ULX9 164 aa20.88■□□□□ 0.93
USP39-203ENST00000409470 MROH6A6NGR9 719 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 ZBBXA8MT70 800 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 CBX4O00257 560 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 SCAMP3O14828 347 aaKnown RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 FGF18O76093 207 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 HAUS5O94927 633 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 F11P03951 625 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 STMN1P16949 149 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 PGGT1BP53609 377 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 RAB10P61026 200 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 KCNJ2P63252 427 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 ITGA9Q13797 1035 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 PABPC1LQ4VXU2 614 aaKnown RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 SPDYAQ5MJ70 313 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 RNF219Q5W0B1 726 aaPredicted RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 OR6P1Q8NGX9 317 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 BLOC1S5Q8TDH9 187 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 PPP4R1Q8TF05 950 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 ARMC5Q96C12 935 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 PSKH2Q96QS6 385 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 SLC22A12Q96S37 553 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 ANAPC1Q9H1A4 1944 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 FBXO6Q9NRD1 293 aaPredicted RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 HAO1Q9UJM8 370 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 EPOP01588 193 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 SLC35E2BP0CK96 405 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 CSRP3P50461 194 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 SLC12A2P55011 1212 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 AQP5P55064 265 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 PRAMEP78395 509 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 RFTN1Q14699 578 aaPredicted RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 TXNDC8Q6A555 127 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 ALG1LQ6GMV1 187 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 CYB5D1Q6P9G0 228 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 ASRGL1Q7L266 308 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 NECAB2Q7Z6G3 386 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 PTAR1Q7Z6K3 402 aaPredicted RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 ARL14EPQ8N8R7 260 aaPredicted RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 TTC16Q8NEE8 873 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 SKA1Q96BD8 255 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 SCYL1Q96KG9 808 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 ZFRQ96KR1 1074 aaKnown RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 KLC4Q9NSK0 619 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 CPSF2Q9P2I0 782 aaKnown RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 MID2Q9UJV3 735 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 RUVBL2Q9Y230 463 aaKnown RBP20.87■□□□□ 0.93
USP39-203ENST00000409470 DNAJC16Q9Y2G8 782 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 TBC1D30Q9Y2I9 924 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 ACOT9Q9Y305 439 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 NUMBLQ9Y6R0 609 aa20.87■□□□□ 0.93
USP39-203ENST00000409470 CBX6O95503 412 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 APOA4P06727 396 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 HDCP19113 662 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 CRABP2P29373 138 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 SCNN1BP51168 640 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 WDR75Q8IWA0 830 aaKnown RBP20.86■□□□□ 0.93
USP39-203ENST00000409470 MFSD6LQ8IWD5 586 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 KCTD4Q8WVF5 259 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 HDAC10Q969S8 669 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 EXOC2Q96KP1 924 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 ACE2Q9BYF1 805 aaPredicted RBP20.86■□□□□ 0.93
USP39-203ENST00000409470 WWP1Q9H0M0 922 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 ZBP1Q9H171 429 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 NOD2Q9HC29 1040 aa20.86■□□□□ 0.93
USP39-203ENST00000409470 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.86■□□□□ 0.934e-10■■■□□ 17.5
USP39-203ENST00000409470 G3V2L1 256 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 H0Y626 953 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 CCL22O00626 93 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 SLC7A4O43246 635 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 LDB2O43679 373 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 TBL1XO60907 577 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 LILRB3O75022 631 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 DNAJC6O75061 913 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 C1RP00736 705 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 CNPP09543 421 aaKnown RBP20.85■□□□□ 0.93
USP39-203ENST00000409470 LAMB3Q13751 1172 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 ZNF460Q14592 562 aa20.85■□□□□ 0.93
USP39-203ENST00000409470 CXorf57Q6NSI4 855 aaKnown RBP20.85■□□□□ 0.93
USP39-203ENST00000409470 CNSTQ6PJW8 725 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms