RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 MAGEA6P43360 314 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 ALDH1A3P47895 512 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 CRYBB1P53674 252 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-204ENST00000409416 FAM187BQ17R55 369 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 CNPY1Q3B7I2 92 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 LSM12Q3MHD2 195 aaKnown RBP13.52□□□□□ -0.25
COL6A2-204ENST00000409416 PLA2G4EQ3MJ16 856 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 ITPRIPL1Q6GPH6 555 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 LRRC8EQ6NSJ5 796 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 DNAJC14Q6Y2X3 702 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-204ENST00000409416 TIFABQ6ZNK6 161 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 UNC93AQ86WB7 457 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 ZMIZ2Q8NF64 920 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 KCNN1Q92952 543 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 NR1H4Q96RI1 486 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-204ENST00000409416 NAT9Q9BTE0 207 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 ZFYVE28Q9HCC9 887 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 DMAP1Q9NPF5 467 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-204ENST00000409416 MKS1Q9NXB0 559 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 RLFQ13129 1914 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 PFDN1O60925 122 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 JUNP05412 331 aaKnown RBP13.51□□□□□ -0.25
COL6A2-204ENST00000409416 GGT5P36269 586 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 SLC10A7Q0GE19 358 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 CYLC2Q14093 348 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-204ENST00000409416 TCEA2Q15560 299 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 CCDC153Q494R4 210 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 UBXN11Q5T124 520 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 STRADAQ7RTN6 431 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 PPHLN1Q8NEY8 458 aaKnown RBP13.51□□□□□ -0.25
COL6A2-204ENST00000409416 HSFY1Q96LI6 401 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 POMKQ9H5K3 350 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 DNAJC28Q9NX36 388 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 SMIM35A0A1B0GVV1 85 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 SIX3O95343 332 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-204ENST00000409416 GUCA1CO95843 209 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 F2P00734 622 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 CHRNA1P02708 482 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 UQCRBP14927 111 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 XRCC1P18887 633 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-204ENST00000409416 THOP1P52888 689 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 LIMK2P53671 638 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 GSTA3Q16772 222 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 LIN52Q52LA3 116 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 AGKQ53H12 422 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 ARMC12Q5T9G4 340 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 BNC2Q6ZN30 1099 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-204ENST00000409416 GK5Q6ZS86 529 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 PDSS2Q86YH6 399 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 GALNT15Q8N3T1 639 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 KYQ8NBH2 561 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 OR7D4Q8NG98 312 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 OR9I1Q8NGQ6 314 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 SERPINI1Q99574 410 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 UXTQ9UBK9 157 aaPredicted RBP13.51□□□□□ -0.25
COL6A2-204ENST00000409416 ACOT9Q9Y305 439 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 ASB3Q9Y575 518 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 PCDHB12Q9Y5F1 795 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 TRPV2Q9Y5S1 764 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 MLNP12872 115 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 STMN1P16949 149 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 CRABP2P29373 138 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 TAS2R39P59534 338 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 ACTRT2Q8TDY3 377 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 OLFM3Q96PB7 478 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 APOL5Q9BWW9 433 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 CDYLQ9Y232 598 aa13.51□□□□□ -0.25
COL6A2-204ENST00000409416 PSME4Q14997 1843 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 PIRO00625 290 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 PSMC3P17980 439 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 KCNQ1P51787 676 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 WNT3AP56704 352 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 ECT2LQ008S8 904 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 FAM83EQ2M2I3 478 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 ARHGAP22Q7Z5H3 698 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 DSELQ8IZU8 1212 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 LGI2Q8N0V4 545 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 TBATAQ96M53 351 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 SEMA3CQ99985 751 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 GRIP2Q9C0E4 1043 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 C1orf21Q9H246 121 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 THRAP10827 490 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 CTPS1P17812 591 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 FMO4P31512 558 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 ACVRL1P37023 503 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 CDK7P50613 346 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 PURAQ00577 322 aaKnown RBP13.5□□□□□ -0.25
COL6A2-204ENST00000409416 TAF10Q12962 218 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 ALFQ53S48 1182 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 CMPK2Q5EBM0 449 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 ZRANB3Q5FWF4 1079 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 STEAP4Q687X5 459 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 NAPEPLDQ6IQ20 393 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 MIER2Q8N344 545 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 TRIB2Q92519 343 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 NFKBIZQ9BYH8 718 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 MUC3BQ9H195 1237 aa13.5□□□□□ -0.25
COL6A2-204ENST00000409416 FBRSL1Q9HCM7 1045 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms