RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 MYEOVQ96EZ4 313 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 FEM1CQ96JP0 617 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF778Q96MU6 729 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 C7orf26Q96N11 449 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 TSNARE1Q96NA8 513 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 LRRC37BQ96QE4 947 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 RAD9AQ99638 391 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 SEMA3CQ99985 751 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 MCMBPQ9BTE3 642 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 TUBB6Q9BUF5 446 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 ACE2Q9BYF1 805 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 ZBP1Q9H171 429 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 ATXN3LQ9H3M9 355 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 PDFQ9HBH1 243 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 SNX15Q9NRS6 342 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 IL1RAPL1Q9NZN1 696 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 LSM7Q9UK45 103 aaKnown RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 ANKRD6Q9Y2G4 727 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 MTO1Q9Y2Z2 717 aaKnown RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 IRAK3Q9Y616 596 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 BRCA2P51587 3418 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 NUP205Q92621 2012 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 A0A096LPK6 155 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 MROH6A6NGR9 719 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 H0YHG0 523 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC7A4O43246 635 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 TSPAN3O60637 253 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 OLFM2O95897 454 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 C1RP00736 705 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 C2P06681 752 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 APOA4P06727 396 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 IRF1P10914 325 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 HOXD9P28356 352 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 GABRR2P28476 465 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 CRABP2P29373 138 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 CA8P35219 290 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 CHRNA4P43681 627 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 LIG3P49916 1009 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 NSUN2Q08J23 767 aaKnown RBP eCLIP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 SF3A3Q12874 501 aaKnown RBP eCLIP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 STX3Q13277 289 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 MSLNQ13421 630 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 SEPT6Q14141 434 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 USP10Q14694 798 aaKnown RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 GALNTL6Q49A17 601 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 INO80DQ53TQ3 878 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 SPDYAQ5MJ70 313 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 N4BP2L1Q5TBK1 243 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 HTR3DQ70Z44 454 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 GALNT7Q86SF2 657 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 TMEM150AQ86TG1 271 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 ZC3HC1Q86WB0 502 aaKnown RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 CRLF3Q8IUI8 442 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 PGBD5Q8N414 524 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 ARL14EPQ8N8R7 260 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 KLHL23Q8NBE8 558 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 HJURPQ8NCD3 748 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 OR7D4Q8NG98 312 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 PHOSPHO2Q8TCD6 241 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 BRSK1Q8TDC3 778 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 VPS39Q96JC1 886 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 CYP2S1Q96SQ9 504 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 GPR22Q99680 433 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 MGME1Q9BQP7 344 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 CINPQ9BW66 212 aaPredicted RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 MUC3BQ9H195 1237 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 TRPC7Q9HCX4 862 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 THAP1Q9NVV9 213 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC17A6Q9P2U8 582 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 MID2Q9UJV3 735 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 FBXO5Q9UKT4 447 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC39A10Q9ULF5 831 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 RIMKLBQ9ULI2 386 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 LZTS1Q9Y250 596 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 MYO18AQ92614 2054 aaKnown RBP6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 VWA8A3KMH1 1905 aa6.33□□□□□ -1.4
GTF3C3-202ENST00000409364 PATJQ8NI35 1801 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 H0Y626 953 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 CBX4O00257 560 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 INSIG1O15503 277 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SNNO75324 88 aaPredicted RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 FGF19O95750 216 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 NDST3O95803 873 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 GSRP00390 522 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 PROCP04070 461 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SERPINE1P05121 402 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 ATP5BP06576 529 aaKnown RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SPATA31D3P0C874 917 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 CPA3P15088 417 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 CDC25CP30307 473 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 BMPR1AP36894 532 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SKIV2L2P42285 1042 aaKnown RBP6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SCTRP47872 440 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 CD151P48509 253 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 ARFIP2P53365 341 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 PRKAA2P54646 552 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC7A9P82251 487 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 POU4F1Q01851 419 aa6.32□□□□□ -1.4
GTF3C3-202ENST00000409364 FPGSQ05932 587 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms