RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TPH1P17752 444 aa17■□□□□ 0.31
SSB-202ENST00000409333 ELK3P41970 407 aa17■□□□□ 0.31
SSB-202ENST00000409333 CCNHP51946 323 aaPredicted RBP17■□□□□ 0.31
SSB-202ENST00000409333 ZP2Q05996 745 aa17■□□□□ 0.31
SSB-202ENST00000409333 CDK18Q07002 472 aa17■□□□□ 0.31
SSB-202ENST00000409333 GALNT3Q14435 633 aa17■□□□□ 0.31
SSB-202ENST00000409333 ZNF234Q14588 700 aa17■□□□□ 0.31
SSB-202ENST00000409333 PON2Q15165 354 aa17■□□□□ 0.31
SSB-202ENST00000409333 CARD16Q5EG05 197 aa17■□□□□ 0.31
SSB-202ENST00000409333 EGFLAMQ63HQ2 1017 aa17■□□□□ 0.31
SSB-202ENST00000409333 CEP128Q6ZU80 1094 aa17■□□□□ 0.31
SSB-202ENST00000409333 RALGPS2Q86X27 583 aaPredicted RBP17■□□□□ 0.31
SSB-202ENST00000409333 CAMK1DQ8IU85 385 aa17■□□□□ 0.31
SSB-202ENST00000409333 RELL1Q8IUW5 271 aa17■□□□□ 0.31
SSB-202ENST00000409333 ADHFE1Q8IWW8 467 aa17■□□□□ 0.31
SSB-202ENST00000409333 MREGQ8N565 214 aa17■□□□□ 0.31
SSB-202ENST00000409333 OR2A12Q8NGT7 310 aa17■□□□□ 0.31
SSB-202ENST00000409333 UBLCP1Q8WVY7 318 aaPredicted RBP17■□□□□ 0.31
SSB-202ENST00000409333 IFT43Q96FT9 208 aa17■□□□□ 0.31
SSB-202ENST00000409333 FEM1CQ96JP0 617 aa17■□□□□ 0.31
SSB-202ENST00000409333 SIGLEC10Q96LC7 697 aa17■□□□□ 0.31
SSB-202ENST00000409333 TRIB3Q96RU7 358 aa17■□□□□ 0.31
SSB-202ENST00000409333 EPB41L4BQ9H329 900 aa17■□□□□ 0.31
SSB-202ENST00000409333 ZNF446Q9NWS9 450 aa17■□□□□ 0.31
SSB-202ENST00000409333 SYBUQ9NX95 663 aa17■□□□□ 0.31
SSB-202ENST00000409333 NINJ2Q9NZG7 142 aa17■□□□□ 0.31
SSB-202ENST00000409333 CHKBQ9Y259 395 aa17■□□□□ 0.31
SSB-202ENST00000409333 TEX264Q9Y6I9 313 aa17■□□□□ 0.31
SSB-202ENST00000409333 ALOX15BO15296 676 aa17■□□□□ 0.31
SSB-202ENST00000409333 ATXN1LP0C7T5 689 aaKnown RBP17■□□□□ 0.31
SSB-202ENST00000409333 SRFP11831 508 aa17■□□□□ 0.31
SSB-202ENST00000409333 HSD17B3P37058 310 aa17■□□□□ 0.31
SSB-202ENST00000409333 SLC1A5Q15758 541 aa17■□□□□ 0.31
SSB-202ENST00000409333 KYNUQ16719 465 aa17■□□□□ 0.31
SSB-202ENST00000409333 SIRPB2Q5JXA9 342 aa17■□□□□ 0.31
SSB-202ENST00000409333 CERCAMQ5T4B2 595 aa17■□□□□ 0.31
SSB-202ENST00000409333 EMC10Q5UCC4 262 aa17■□□□□ 0.31
SSB-202ENST00000409333 CHST14Q8NCH0 376 aa17■□□□□ 0.31
SSB-202ENST00000409333 FBXO36Q8NEA4 188 aa17■□□□□ 0.31
SSB-202ENST00000409333 PDCD6IPQ8WUM4 868 aaKnown RBP17■□□□□ 0.31
SSB-202ENST00000409333 UCMAQ8WVF2 138 aa17■□□□□ 0.31
SSB-202ENST00000409333 PTPRN2Q92932 1015 aa17■□□□□ 0.31
SSB-202ENST00000409333 ZDHHC6Q9H6R6 413 aa17■□□□□ 0.31
SSB-202ENST00000409333 C8orf33Q9H7E9 229 aaPredicted RBP17■□□□□ 0.31
SSB-202ENST00000409333 THEGQ9P2T0 379 aa17■□□□□ 0.31
SSB-202ENST00000409333 DYNC1LI1Q9Y6G9 523 aaKnown RBP17■□□□□ 0.31
SSB-202ENST00000409333 WASH3PC4AMC7 463 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 K7EQS6 105 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 PRLP01236 227 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 PDHA1P08559 390 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 CBLBQ13191 982 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 MYLK3Q32MK0 819 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 DNAJC21Q5F1R6 531 aaKnown RBP16.99■□□□□ 0.31
SSB-202ENST00000409333 DENND2CQ68D51 928 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 NUDT18Q6ZVK8 323 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 SUGP1Q8IWZ8 645 aaKnown RBP16.99■□□□□ 0.31
SSB-202ENST00000409333 ACOX2Q99424 681 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 TRIM56Q9BRZ2 755 aaKnown RBP16.99■□□□□ 0.31
SSB-202ENST00000409333 TMEM245Q9H330 911 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 SLC2A4RGQ9NR83 387 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 THAP10Q9P2Z0 257 aaPredicted RBP16.99■□□□□ 0.31
SSB-202ENST00000409333 SLC8A2Q9UPR5 921 aa16.99■□□□□ 0.31
SSB-202ENST00000409333 RIPK2O43353 540 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 ACSL3O95573 720 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 EGFP01133 1207 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 IL12RB1P42701 662 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 MAPK8P45983 427 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 SEC13P55735 322 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 PFKPQ01813 784 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 CASP8Q14790 479 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 CCDC38Q502W7 563 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 SERPINA13PQ6UXR4 307 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 CAPN12Q6ZSI9 719 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 KDM1BQ8NB78 822 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 PYROXD1Q8WU10 500 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 ARNT2Q9HBZ2 717 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 CACNA2D2Q9NY47 1150 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 STARD13Q9Y3M8 1113 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 MAD1L1Q9Y6D9 718 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 BPTFQ12830 3046 aa16.98■□□□□ 0.31
SSB-202ENST00000409333 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 SDR42E2A6NKP2 422 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 SHISA7A6NL88 538 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 TRAFD1O14545 582 aaPredicted RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 NDST3O95803 873 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 CPP00450 1065 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 EPOP01588 193 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 HLA-DPA1P20036 260 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 PRKCHP24723 683 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 RECQLP46063 649 aaPredicted RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 BCL2L1Q07817 233 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 POU6F1Q14863 301 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 HNRNPA1L2Q32P51 320 aaKnown RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 LRRK1Q38SD2 2015 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 TMEM196Q5HYL7 178 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 CASC4Q6P4E1 433 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 TRMT10CQ7L0Y3 403 aaKnown RBP16.97■□□□□ 0.31
SSB-202ENST00000409333 PLPP6Q8IY26 295 aa16.97■□□□□ 0.31
SSB-202ENST00000409333 LPCAT1Q8NF37 534 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms