RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 ASIC3Q9UHC3 531 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 PPM1HQ9ULR3 514 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 PPIL1Q9Y3C6 166 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 WASF2Q9Y6W5 498 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 BPTFQ12830 3046 aa13.17□□□□□ -0.3
LIMS2-203ENST00000409254 TRAFD1O14545 582 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-203ENST00000409254 DNALI1O14645 258 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-203ENST00000409254 SLC7A4O43246 635 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 FZD6O60353 706 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 ALDH1A2O94788 518 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 SEC31AO94979 1220 aaKnown RBP13.16□□□□□ -0.3
LIMS2-203ENST00000409254 IGLV3-19P01714 112 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 TUBBP07437 444 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 MLNP12872 115 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 C5AR1P21730 350 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 IVDP26440 423 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 RGRP47804 291 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 GRIA4P48058 902 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 SCNN1BP51168 640 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 NUBP1P53384 320 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 SEC13P55735 322 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 SKOR1P84550 965 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 GPS1Q13098 491 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 KCNJ11Q14654 390 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 TTC31Q49AM3 519 aaPredicted RBP13.16□□□□□ -0.3
LIMS2-203ENST00000409254 ZNF805Q5CZA5 627 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 DUPD1Q68J44 220 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 KDELC1Q6UW63 502 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 PPP1R21Q6ZMI0 780 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 USP30Q70CQ3 517 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
LIMS2-203ENST00000409254 KBTBD6Q86V97 674 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 PPIL6Q8IXY8 311 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 NDUFAF2Q8N183 169 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 MCUQ8NE86 351 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■■■■ 64.2
LIMS2-203ENST00000409254 ACOX2Q99424 681 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 FSD1LQ9BXM9 530 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 HDAC8Q9BY41 377 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 TNKS2Q9H2K2 1166 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 RAB6BQ9NRW1 208 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 TPX2Q9ULW0 747 aaKnown RBP13.16□□□□□ -0.3
LIMS2-203ENST00000409254 TTLL3Q9Y4R7 772 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 ACTL7AQ9Y615 435 aa13.16□□□□□ -0.3
LIMS2-203ENST00000409254 CACNA1HO95180 2353 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 LOC285095A0A1B0GVY8 99 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 E7EVH7 732 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 NDST3O95803 873 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 FGF1P05230 155 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 ITIH2P19823 946 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 CD86P42081 329 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 COPAP53621 1224 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 MAXP61244 160 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 SATB1Q01826 763 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 DSC2Q02487 901 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 ITKQ08881 620 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 NIPAL4Q0D2K0 466 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 CALCOCO2Q13137 446 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 CST6Q15828 149 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 ATXN7L2Q5T6C5 722 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-203ENST00000409254 ARMC12Q5T9G4 340 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 EMC10Q5UCC4 262 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 GDPD4Q6W3E5 623 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 LEKR1Q6ZMV7 388 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 CEP128Q6ZU80 1094 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 RASSF3Q86WH2 238 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 GLIS1Q8NBF1 620 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 NOA1Q8NC60 698 aaKnown RBP13.15□□□□□ -0.3
LIMS2-203ENST00000409254 VOPP1Q96AW1 172 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 OXNAD1Q96HP4 312 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-203ENST00000409254 EXOC2Q96KP1 924 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 TRIB3Q96RU7 358 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 LYSMD1Q96S90 227 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 FAM129BQ96TA1 746 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 GORASP1Q9BQQ3 440 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 CEP41Q9BYV8 373 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 SUV39H2Q9H5I1 410 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 C10orf88Q9H8K7 445 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 ETNK1Q9HBU6 452 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
LIMS2-203ENST00000409254 FAM114A2Q9NRY5 505 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 HACD3Q9P035 362 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 EBF1Q9UH73 591 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 EVLQ9UI08 416 aaPredicted RBP13.15□□□□□ -0.3
LIMS2-203ENST00000409254 FZD4Q9ULV1 537 aa13.15□□□□□ -0.3
LIMS2-203ENST00000409254 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 AP1G1O43747 822 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 LEFTY1O75610 366 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 HEXIM1O94992 359 aaKnown RBP13.14□□□□□ -0.31
LIMS2-203ENST00000409254 PGLSO95336 258 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 METTL18O95568 372 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 APRTP07741 180 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 HLA-EP13747 358 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 TNFRSF8P28908 595 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 ADRA1AP35348 466 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 ADCY8P40145 1251 aa13.14□□□□□ -0.31
LIMS2-203ENST00000409254 WNT3AP56704 352 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms