RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 ARRDC2Q8TBH0 407 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 SPOCK2Q92563 424 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 TCEAL3Q969E4 200 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 HAUS1Q96CS2 278 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 TUBGCP5Q96RT8 1024 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 TLR10Q9BXR5 811 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 KDM4CQ9H3R0 1056 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 SUV39H2Q9H5I1 410 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 NOD2Q9HC29 1040 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 NT5MQ9NPB1 228 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 PYCARDQ9ULZ3 195 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 ATP8A1Q9Y2Q0 1164 aa16.06■□□□□ 0.16
GDPD3-202ENST00000406256 TCRBV7S2A1N4TA0A589 114 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 USP27XA6NNY8 438 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 APOC4-APOC2K7ER74 178 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 AP1G1O43747 822 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 NRDCO43847 1150 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 LRP3O75074 770 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 APOC2P02655 101 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 MMP2P08253 660 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 CCNB1P14635 433 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 TIMP2P16035 220 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 ITIH2P19823 946 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 SCNN1BP51168 640 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 RENBPP51606 427 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 AP1S1P61966 158 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 NIPAL4Q0D2K0 466 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 SFSWAPQ12872 951 aaKnown RBP16.05■□□□□ 0.16
GDPD3-202ENST00000406256 ODF2Q5BJF6 829 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 LRRC73Q5JTD7 316 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 SYT12Q8IV01 421 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 PIGKQ92643 395 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 ANP32BQ92688 251 aaKnown RBP16.05■□□□□ 0.16
GDPD3-202ENST00000406256 FOXJ1Q92949 421 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 PPP1R16AQ96I34 528 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 SEMA4GQ9NTN9 838 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 ZFR2Q9UPR6 939 aaKnown RBP16.05■□□□□ 0.16
GDPD3-202ENST00000406256 ITM2BQ9Y287 266 aa16.05■□□□□ 0.16
GDPD3-202ENST00000406256 FAM47DPA6NHR8 397 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 LRRC72A6NJI9 287 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 WNT9AO14904 365 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 HTRA2O43464 458 aaPredicted RBP16.04■□□□□ 0.16
GDPD3-202ENST00000406256 JCHAINP01591 159 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 PTMAP06454 111 aaKnown RBP16.04■□□□□ 0.16
GDPD3-202ENST00000406256 ZNF806P0C7X5 589 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 CCR5P51681 352 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 DSC2Q02487 901 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 RAD51Q06609 339 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 WASHC5Q12768 1159 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 TRAF2Q12933 501 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 CSRP2Q16527 193 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 TMEM259Q4ZIN3 620 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 TRIM69Q86WT6 500 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 UBL4BQ8N7F7 174 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 CCNYQ8ND76 341 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 ACTL9Q8TC94 416 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 ZNF641Q96N77 438 aaPredicted RBP16.04■□□□□ 0.16
GDPD3-202ENST00000406256 QKIQ96PU8 341 aaKnown RBP eCLIP16.04■□□□□ 0.16
GDPD3-202ENST00000406256 CEP41Q9BYV8 373 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 CAPN10Q9HC96 672 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 PREBQ9HCU5 417 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 RXFP3Q9NSD7 469 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 RBM22Q9NW64 420 aaKnown RBP eCLIP16.04■□□□□ 0.168e-6■■□□□ 12.7
GDPD3-202ENST00000406256 AMACRQ9UHK6 382 aa16.04■□□□□ 0.16
GDPD3-202ENST00000406256 EIF2B4Q9UI10 523 aaKnown RBP16.04■□□□□ 0.16
GDPD3-202ENST00000406256 A0A1W2PPC4 97 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 MEI4A8MW99 385 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 PPP1R12AO14974 1030 aaPredicted RBP16.03■□□□□ 0.16
GDPD3-202ENST00000406256 FZD6O60353 706 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 FSBPO95073 299 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 PTPN3P26045 913 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 HOXD12P35452 270 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 OTUD4Q01804 1114 aaKnown RBP16.03■□□□□ 0.16
GDPD3-202ENST00000406256 BNC1Q01954 994 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 CCDC173Q0VFZ6 552 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 AP1B1Q10567 949 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 FGL2Q14314 439 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 GRM3Q14832 879 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 SF3A2Q15428 464 aaKnown RBP16.03■□□□□ 0.16
GDPD3-202ENST00000406256 RALGPS1Q5JS13 557 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 TRIM58Q8NG06 486 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 HCAR2Q8TDS4 363 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 P3H4Q92791 437 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 SEMA3CQ99985 751 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 FAM118BQ9BPY3 351 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 BRD8Q9H0E9 1235 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 ATP13A3Q9H7F0 1226 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 C10orf88Q9H8K7 445 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 DYRK4Q9NR20 520 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 R3HDM2Q9Y2K5 976 aaKnown RBP16.03■□□□□ 0.16
GDPD3-202ENST00000406256 PCDHGC4Q9Y5F7 938 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 SCN8AQ9UQD0 1980 aa16.03■□□□□ 0.16
GDPD3-202ENST00000406256 CNOT1A5YKK6 2376 aaKnown RBP16.03■□□□□ 0.16
GDPD3-202ENST00000406256 TBC1D3DA0A087WVF3 549 aa16.02■□□□□ 0.16
GDPD3-202ENST00000406256 TBC1D3IA0A087WXS9 549 aa16.02■□□□□ 0.16
GDPD3-202ENST00000406256 TBC1D3EA0A087X179 549 aa16.02■□□□□ 0.16
GDPD3-202ENST00000406256 TBC1D3KA0A087X1G2 549 aa16.02■□□□□ 0.16
GDPD3-202ENST00000406256 TBC1D3FA6NER0 549 aaPredicted RBP16.02■□□□□ 0.16
GDPD3-202ENST00000406256 TBC1D3LB9A6J9 549 aa16.02■□□□□ 0.16
GDPD3-202ENST00000406256 RNGTTO60942 597 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms