RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 TRIM13O60858 407 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 ITGA2BP08514 1039 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 ELFN1P0C7U0 828 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 CCDC166P0CW27 439 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 TSHRP16473 764 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 HOXB8P17481 243 aaPredicted RBP9.17□□□□□ -0.94
LIG4-202ENST00000405925 GRK2P25098 689 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 MC4RP32245 332 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 GPR1P46091 355 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 MUM1Q2TAK8 710 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 FAM46CQ5VWP2 391 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 ANKS1BQ7Z6G8 1248 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 CMC1Q7Z7K0 106 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 C14orf80Q86SX3 495 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 SLC39A11Q8N1S5 342 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 TBC1D19Q8N5T2 526 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 CD101Q93033 1021 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 NCLNQ969V3 563 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 VCX3BQ9H321 246 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 ACTR8Q9H981 624 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 PCDHGB4Q9UN71 923 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 F5P12259 2224 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 CLASP2O75122 1294 aaKnown RBP9.17□□□□□ -0.94
LIG4-202ENST00000405925 TTPAP49638 278 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 THOP1P52888 689 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 PPIDQ08752 370 aaKnown RBP9.17□□□□□ -0.94
LIG4-202ENST00000405925 FOXD4Q12950 439 aaPredicted RBP9.17□□□□□ -0.94
LIG4-202ENST00000405925 DSC3Q14574 896 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 FAM124AQ86V42 546 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 SYTL1Q8IYJ3 562 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 FBXO39Q8N4B4 442 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 CXorf38Q8TB03 319 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 TBATAQ96M53 351 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 ZFYVE1Q9HBF4 777 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 LNPEPQ9UIQ6 1025 aa9.17□□□□□ -0.94
LIG4-202ENST00000405925 MTO1Q9Y2Z2 717 aaKnown RBP9.17□□□□□ -0.94
LIG4-202ENST00000405925 H0Y3Z8 333 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 J3KR12 359 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ANGPT2O15123 496 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 RHOP08100 348 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 PABPC1P11940 636 aaKnown RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 CLCN5P51795 746 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 IL2P60568 153 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 USP46P62068 366 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 CAPRIN1Q14444 709 aaKnown RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 MAPRE2Q15555 327 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 FAM43BQ6ZT52 329 aaPredicted RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 TRPM8Q7Z2W7 1104 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 PQLC3Q8N755 202 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 OR4L1Q8NH43 312 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 TMEM174Q8WUU8 243 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 C1QTNF7Q9BXJ2 289 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ABCG8Q9H221 673 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ECT2Q9H8V3 914 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 RIC8BQ9NVN3 520 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 GRIN2DO15399 1336 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 FAM72CH0Y354 149 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 MEFVO15553 781 aaPredicted RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 CTSAP10619 480 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 HSPA8P11142 646 aaKnown RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 ENO3P13929 434 aaPredicted RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 CPA2P48052 419 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 HCAR3P49019 387 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ARL4DP49703 201 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 BTKQ06187 659 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ALFQ53S48 1182 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 FAM72AQ5TYM5 149 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 FAM72DQ6L9T8 149 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ARMC6Q6NXE6 501 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 PACS1Q6VY07 963 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 FAM72BQ86X60 149 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 SLC2A13Q96QE2 648 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 COPS8Q99627 209 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 EFHD1Q9BUP0 239 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ALG9Q9H6U8 611 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 FBXO10Q9UK96 956 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ZNF840PA6NDX5 716 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 INPP4BO15327 924 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 KDM1AO60341 852 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 CCNT2O60583 730 aaKnown RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 HLA-DQB2P05538 268 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 GDI1P31150 447 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 RPA3P35244 121 aaPredicted RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 GRIA1P42261 906 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 AP1S1P61966 158 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 RAB33AQ14088 237 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 OASLQ15646 514 aaKnown RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 DLG2Q15700 870 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 C1orf146Q5VVC0 180 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 TAS1R1Q7RTX1 841 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 LDB1Q86U70 411 aaPredicted RBP9.16□□□□□ -0.94
LIG4-202ENST00000405925 ZNF366Q8N895 744 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ACDQ96AP0 544 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 SDCCAG3Q96C92 435 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 IGSF9Q9P2J2 1179 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 ZMYM5Q9UJ78 669 aa9.16□□□□□ -0.94
LIG4-202ENST00000405925 QSER1Q2KHR3 1735 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms