RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 ARHGAP45Q92619 1136 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 EZH1Q92800 747 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 OPTNQ96CV9 577 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 MRPL38Q96DV4 380 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 XAGE2Q96GT9 111 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 C1orf159Q96HA4 380 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TPD52L3Q96J77 140 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 FCRL4Q96PJ5 515 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ALS2CR12Q96Q35 445 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PANX2Q96RD6 677 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 SELENOSQ9BQE4 189 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PIMREGQ9BSJ6 248 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 HAUS8Q9BT25 410 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 ZSCAN5AQ9BUG6 496 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 C9orf16Q9BUW7 83 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TTYH3Q9C0H2 523 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 RNF32Q9H0A6 362 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 NTN4Q9HB63 628 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 GOLGA2P5Q9HBQ8 144 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 TREM1Q9NP99 234 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PRDM9Q9NQV7 894 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 PRDM8Q9NQV8 689 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 DDX28Q9NUL7 540 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 POLLQ9UGP5 575 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 MTMR6Q9Y217 621 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 MRPS2Q9Y399 296 aaKnown RBP3.99□□□□□ -1.77
CLHC1-201ENST00000401408 EMC9Q9Y3B6 208 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 DMRT1Q9Y5R6 373 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 HS3ST4Q9Y661 456 aa3.99□□□□□ -1.77
CLHC1-201ENST00000401408 EPG5Q9HCE0 2579 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 DOCK3Q8IZD9 2030 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 FRYLO94915 3013 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 A0A1W2PPW3 197 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 TARSL2A2RTX5 802 aaKnown RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 FAM177BA6PVY3 158 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 E9PI62 339 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 H0Y8G0 127 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 DNAJB6O75190 326 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CTAG2O75638 210 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 SPDEFO95238 335 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CCNDBP1O95273 360 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CCDC192P0DO97 292 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 KRT3P12035 628 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 BMP1P13497 986 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 HNRNPA2B1P22626 353 aaKnown RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 GUCY1A2P33402 732 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 ECI1P42126 302 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 GAD2Q05329 585 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 SF3A3Q12874 501 aaKnown RBP eCLIP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 TDGQ13569 410 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 RFTN1Q14699 578 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CASP8Q14790 479 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 NTRK2Q16620 822 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 FSCN1Q16658 493 aaKnown RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 SLC9B1Q4ZJI4 515 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 HEPHL1Q6MZM0 1159 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 FRMD7Q6ZUT3 714 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 KCNK18Q7Z418 384 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 FAM124AQ86V42 546 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 KBTBD6Q86V97 674 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 TDHQ8IZJ6 230 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 POC5Q8NA72 575 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 ZNF511Q8NB15 262 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 TRPV1Q8NER1 839 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 PSMA8Q8TAA3 256 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 FAM81AQ8TBF8 368 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CCDC12Q8WUD4 166 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 PDCD6IPQ8WUM4 868 aaKnown RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 UBLCP1Q8WVY7 318 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 HMCESQ96FZ2 354 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 PGM2Q96G03 612 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 SNF8Q96H20 258 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 TRAPPC9Q96Q05 1148 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 ELF4Q99607 663 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CCT7Q99832 543 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 SEMA3CQ99985 751 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 MTG1Q9BT17 334 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 GPR62Q9BZJ7 368 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 TWSG1Q9GZX9 223 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 RAD21L1Q9H4I0 556 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 EVA1AQ9H8M9 152 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CHODLQ9H9P2 273 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 NECTIN3Q9NQS3 549 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 SACM1LQ9NTJ5 587 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 TBC1D13Q9NVG8 400 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 COL20A1Q9P218 1284 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 MARCH4Q9P2E8 410 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CSADQ9Y600 493 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 PMF1-BGLAPU3KQ54 211 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 COL1A1P02452 1464 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-201ENST00000401408 CFAP47Q6ZTR5 3102 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 MAP3K15Q6ZN16 1313 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 DMXL1Q9Y485 3027 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 ZFHX4Q86UP3 3567 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 GOLGA8IPA6NC78 632 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 GOLGA8OA6NCC3 632 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 OR5K4A6NMS3 321 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 GOLGA8NF8WBI6 632 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 H3BUI4 141 aa3.98□□□□□ -1.77
CLHC1-201ENST00000401408 RNF225M0QZC1 329 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms