RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 RETP07949 1114 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 SERPINF2P08697 491 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 PRLRP16471 622 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 CA4P22748 312 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 NFKBIAP25963 317 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 PTPN3P26045 913 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 ATP5OP48047 213 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 EIF3EP60228 445 aaKnown RBP17.85■□□□□ 0.45
CTNS-203ENST00000399306 ZBTB17Q13105 803 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 SYCP2LQ5T4T6 812 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 PEAR1Q5VY43 1037 aaPredicted RBP17.85■□□□□ 0.45
CTNS-203ENST00000399306 FBXL19Q6PCT2 694 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.85■□□□□ 0.45
CTNS-203ENST00000399306 PRR23BQ6ZRT6 265 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 PARS2Q7L3T8 475 aaKnown RBP17.85■□□□□ 0.45
CTNS-203ENST00000399306 ZC3H18Q86VM9 953 aaKnown RBP17.85■□□□□ 0.45
CTNS-203ENST00000399306 RASGEF1CQ8N431 466 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 CNTD1Q8N815 330 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 FRMD1Q8N878 549 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 SLC35B2Q8TB61 432 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 ARRDC2Q8TBH0 407 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 DNASE2BQ8WZ79 361 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 NAP1L3Q99457 506 aaPredicted RBP17.85■□□□□ 0.45
CTNS-203ENST00000399306 SEMA3CQ99985 751 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 NOD2Q9HC29 1040 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 HOMER3Q9NSC5 361 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 FAM86C1Q9NVL1 165 aa17.85■□□□□ 0.45
CTNS-203ENST00000399306 TSPAN6O43657 245 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 GKP32189 559 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 METAP1P53582 386 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 ELP6Q0PNE2 266 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 WASHC5Q12768 1159 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 WDR45BQ5MNZ6 344 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 KIAA0895LQ68EN5 471 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 DRICH1Q6PGQ1 229 aaPredicted RBP17.84■□□□□ 0.45
CTNS-203ENST00000399306 RABEPKQ7Z6M1 372 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 TRIM69Q86WT6 500 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 CAMK1DQ8IU85 385 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 OR14C36Q8NHC7 312 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 PPP1R2P1Q96PQ5 205 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 GPR174Q9BXC1 333 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 SLC25A51Q9H1U9 297 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 INVSQ9Y283 1065 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 RIF1Q5UIP0 2472 aaKnown RBP17.84■□□□□ 0.45
CTNS-203ENST00000399306 MYO15AQ9UKN7 3530 aa17.84■□□□□ 0.45
CTNS-203ENST00000399306 TRPM6Q9BX84 2022 aa17.83■□□□□ 0.45
CTNS-203ENST00000399306 AREL1O15033 823 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 LATO43561 262 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 STK10O94804 968 aaKnown RBP17.83■□□□□ 0.44
CTNS-203ENST00000399306 TCP1P17987 556 aaKnown RBP17.83■□□□□ 0.44
CTNS-203ENST00000399306 STIP1P31948 543 aaKnown RBP17.83■□□□□ 0.44
CTNS-203ENST00000399306 TAS2R38P59533 333 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 MAXP61244 160 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 RPL26P61254 145 aaKnown RBP17.83■□□□□ 0.44
CTNS-203ENST00000399306 UGP2Q16851 508 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 CFAP58Q5T655 872 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 LYSMD4Q5XG99 296 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 KIAA1161Q6NSJ0 714 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 FAM124AQ86V42 546 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 ASB12Q8WXK4 309 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 TADA1Q96BN2 335 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 IMP4Q96G21 291 aaKnown RBP17.83■□□□□ 0.44
CTNS-203ENST00000399306 USP29Q9HBJ7 922 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 GLOD4Q9HC38 313 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 VPS45Q9NRW7 570 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 RAPGEFL1Q9UHV5 662 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 GMEB2Q9UKD1 530 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 SNX12Q9UMY4 172 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 RPL26L1Q9UNX3 145 aaKnown RBP17.83■□□□□ 0.44
CTNS-203ENST00000399306 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.83■□□□□ 0.44
CTNS-203ENST00000399306 PPIL1Q9Y3C6 166 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 FADS3Q9Y5Q0 445 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 PI4KAP42356 2102 aa17.83■□□□□ 0.44
CTNS-203ENST00000399306 FAM186AA6NE01 2351 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 CACNA1EQ15878 2313 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 C5orf60A6NFR6 353 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 UPK3BL1B0FP48 263 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 UPK3BL2E5RIL1 263 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 RNF103O00237 685 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 ENC1O14682 589 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 FZD6O60353 706 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 FOXD2O60548 495 aaPredicted RBP17.82■□□□□ 0.44
CTNS-203ENST00000399306 PIGNO95427 931 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 FGGP02679 453 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 TIMP2P16035 220 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 RBL1P28749 1068 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 GNG11P61952 73 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 ITKQ08881 620 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 CCNG2Q16589 344 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 ARMC12Q5T9G4 340 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 PAPD7Q5XG87 772 aaKnown RBP17.82■□□□□ 0.44
CTNS-203ENST00000399306 ITPRIPL1Q6GPH6 555 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 DARS2Q6PI48 645 aaKnown RBP17.82■□□□□ 0.44
CTNS-203ENST00000399306 TTC7BQ86TV6 843 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 SLC41A1Q8IVJ1 513 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 TMEFF1Q8IYR6 380 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 NDUFAF2Q8N183 169 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 ACTRT1Q8TDG2 376 aa17.82■□□□□ 0.44
CTNS-203ENST00000399306 RTP4Q96DX8 246 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms