RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 TBC1D3LB9A6J9 549 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 CFIP05156 583 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 TUBBP07437 444 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 TBC1D3HP0C7X1 549 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 ID4P47928 161 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 RAD51Q06609 339 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 RFTN1Q14699 578 aaPredicted RBP17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 PAFAH1B3Q15102 231 aaKnown RBP17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 DUOXA1Q1HG43 343 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 GLE1Q53GS7 698 aaKnown RBP17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 TRIM61Q5EBN2 209 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 PIP5KL1Q5T9C9 394 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 NCBP2-AS2Q69YL0 99 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 TBC1D3GQ6DHY5 549 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 TBC1D3CQ6IPX1 549 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 ERN2Q76MJ5 926 aaKnown RBP17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 VSIG1Q86XK7 387 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 TBC1D3Q8IZP1 549 aaPredicted RBP17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 ATPAF2Q8N5M1 289 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 LRRN4CLQ8ND94 238 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 EXOC2Q96KP1 924 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 ZNF599Q96NL3 588 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 RNF157Q96PX1 679 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 RTKNQ9BST9 563 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 NUSAP1Q9BXS6 441 aaKnown RBP17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 HDAC8Q9BY41 377 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 KDM4CQ9H3R0 1056 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 DLL3Q9NYJ7 618 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 LHX3Q9UBR4 397 aa17.71■□□□□ 0.43
SMIM11A-202ENST00000399295 PLRG1O43660 514 aaKnown RBP17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 MAFKO60675 156 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 IGHV4-34P06331 123 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 ITGB7P26010 798 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 IRX4P78413 519 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 C2orf54Q08AI8 447 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 NUMA1Q14980 2115 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 SLC23A3Q6PIS1 610 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 LRRC49Q8IUZ0 686 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 PQLC3Q8N755 202 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 TSEN2Q8NCE0 465 aaKnown RBP17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 RNF25Q96BH1 459 aaPredicted RBP17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 RUNDC3BQ96NL0 473 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 CINPQ9BW66 212 aaPredicted RBP17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 OSBPL1AQ9BXW6 950 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 MAK16Q9BXY0 300 aaKnown RBP17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 OSBPL8Q9BZF1 889 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 HOMER3Q9NSC5 361 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 SMARCAL1Q9NZC9 954 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 SLC6A14Q9UN76 642 aa17.7■□□□□ 0.42
SMIM11A-202ENST00000399295 A0A1B0GTW7 788 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 C3orf70A6NLC5 250 aaPredicted RBP17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 ZNF487B1APH4 448 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 DYNC1I1O14576 645 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 MFSD11O43934 449 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 GDF9O60383 454 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 TJP3O95049 919 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 UGT2B4P06133 528 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 SERPINF2P08697 491 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 CD27P26842 260 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 CCR5P51681 352 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 NEK3P51956 506 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 TAS2R38P59533 333 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 FOXK2Q01167 660 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 SLC10A7Q0GE19 358 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 LBRQ14739 615 aaKnown RBP17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 ERCC6LQ2NKX8 1250 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 ZNF805Q5CZA5 627 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 TFDP3Q5H9I0 405 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 TMCO4Q5TGY1 634 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 FBXL19Q6PCT2 694 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 GDPD4Q6W3E5 623 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 SPOCD1Q6ZMY3 1216 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 ERMP1Q7Z2K6 904 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 ZCCHC9Q8N567 271 aaKnown RBP17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 NSMCE1Q8WV22 266 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 VOPP1Q96AW1 172 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 CPEB1Q9BZB8 566 aaKnown RBP17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 RXFP3Q9NSD7 469 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 SEPT3Q9UH03 358 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 CDV3Q9UKY7 258 aaKnown RBP17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 CACNA1EQ15878 2313 aa17.69■□□□□ 0.42
SMIM11A-202ENST00000399295 LNP1A1A4G5 178 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 C16orf96A6NNT2 1141 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 BCAT2O15382 392 aaPredicted RBP17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 INSIG1O15503 277 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 RENBPP51606 427 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 NSUN2Q08J23 767 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 GALNT2Q10471 571 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 TAZQ16635 292 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 NOA1Q8NC60 698 aaKnown RBP17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 C1orf216Q8TAB5 229 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 KLHL32Q96NJ5 620 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 PSKH2Q96QS6 385 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 CAPN10Q9HC96 672 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 PREBQ9HCU5 417 aa17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 NYNRINQ9P2P1 1898 aaKnown RBP17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 TNRC6BQ9UPQ9 1833 aaKnown RBP17.68■□□□□ 0.42
SMIM11A-202ENST00000399295 hCG_1818297A0A087WSY0 165 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms