RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 EFEMP2O95967 443 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CXCL10P02778 98 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MMP2P08253 660 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GNAZP19086 355 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 NUMBP49757 651 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CDH4P55283 916 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ARPP19P56211 112 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ARHGAP8P85298 464 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 IRF9Q00978 393 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 DUSP4Q13115 394 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CTBP1Q13363 440 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CENPLQ8N0S6 344 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TDRD5Q8NAT2 981 aaKnown RBP17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RBM15BQ8NDT2 890 aaKnown RBP17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GPR150Q8NGU9 434 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PLD4Q96BZ4 506 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PRR11Q96HE9 360 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 FAR2Q96K12 515 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SCYL1Q96KG9 808 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CNDP1Q96KN2 507 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GPR78Q96P69 363 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 DDX50Q9BQ39 737 aaKnown RBP17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CCDC28BQ9BUN5 200 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 COG4Q9H9E3 785 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 NCKIPSDQ9NZQ3 722 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SLC27A5Q9Y2P5 690 aa17.87■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 FKTNO75072 461 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TBX18O95935 607 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ATP5F1P24539 256 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ETFBP38117 255 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ALDH7A1P49419 539 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 COPAP53621 1224 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GALNT1Q10472 559 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SEPT6Q14141 434 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 RTP2Q5QGT7 225 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TPGS2Q68CL5 300 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SETD3Q86TU7 594 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SLC41A1Q8IVJ1 513 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 DENND6AQ8IWF6 608 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SCUBE1Q8IWY4 988 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TTC9BQ8N6N2 239 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 FBXO22Q8NEZ5 403 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 STMN2Q93045 179 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 IFT43Q96FT9 208 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ELMO2Q96JJ3 720 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MCM8Q9UJA3 840 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PLA2G4CQ9UP65 541 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 LRRC42Q9Y546 428 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GREB1Q4ZG55 1949 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GOLGA8TH3BQL2 631 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CLDN11O75508 207 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 VNN2O95498 520 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GRIA4P48058 902 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ZNF235Q14590 738 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SH2D4BQ5SQS7 431 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SEL1L3Q68CR1 1132 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ZNF354CQ86Y25 554 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 KCTD4Q8WVF5 259 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MYRFLQ96LU7 910 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 UXTQ9UBK9 157 aaPredicted RBP17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SEPT3Q9UH03 358 aa17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 AFF4Q9UHB7 1163 aaKnown RBP17.86■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TBKBP1A7MCY6 615 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PHGDHO43175 533 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 DIAPH2O60879 1101 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SERPINF2P08697 491 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TAS2R39P59534 338 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MPP1Q00013 466 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 DSC2Q02487 901 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 KDSRQ06136 332 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ACAP2Q15057 778 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PCSK7Q16549 785 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SIRPB2Q5JXA9 342 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 HECTD3Q5T447 861 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 NAPRTQ6XQN6 538 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ACAD11Q709F0 780 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CHST9Q7L1S5 443 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MAVSQ7Z434 540 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CILP2Q8IUL8 1156 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SLC22A9Q8IVM8 553 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 AFAP1L2Q8N4X5 818 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ZNF781Q8N8C0 355 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 ACVR1CQ8NER5 493 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 BRSK1Q8TDC3 778 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 OMDQ99983 421 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 PDFQ9HBH1 243 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 POPDC3Q9HBV1 291 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TCF7L2Q9NQB0 619 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 CPSF2Q9P2I0 782 aaKnown RBP17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SLC2A6Q9UGQ3 507 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 MAFFQ9ULX9 164 aa17.85■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TRPC5OSA6NMA1 111 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 LTA4HP09960 611 aaKnown RBP17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 SBK3P0C264 359 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GM2AP17900 193 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 TFEBP19484 476 aa17.84■□□□□ 0.45
HLA-DQB1-204ENST00000399084 GLDCP23378 1020 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms