RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 MAP2K2P36507 400 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 RPS3AP61247 264 aaKnown RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 PRKG2Q13237 762 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 GALNTL6Q49A17 601 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 C3orf62Q6ZUJ4 267 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 CLEC1AQ8NC01 280 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ASZ1Q8WWH4 475 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 KBTBD4Q9NVX7 518 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 FANCLQ9NW38 375 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 TRPS1Q9UHF7 1281 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 TBX20Q9UMR3 447 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ERVK-7P63135 1459 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ABHD14A-ACY1A0A1B0GW23 586 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 SLC15A5A6NIM6 579 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 FPGTO14772 594 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 SLC25A14O95258 325 aaPredicted RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 OXSR1O95747 527 aaPredicted RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 ALPIP09923 528 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 SERPINB1P30740 379 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 LRRC41Q15345 812 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ALG10BQ5I7T1 473 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 FNBP1LQ5T0N5 605 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 FBXO38Q6PIJ6 1188 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 SLC36A4Q6YBV0 504 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 MSANTD1Q6ZTZ1 278 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 RIOX2Q8IUF8 465 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 KSR1Q8IVT5 923 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 AP3S1Q92572 193 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 C5orf34Q96MH7 638 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 TMEM121Q9BTD3 319 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ZNF624Q9P2J8 865 aaPredicted RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 ZNF726A6NNF4 738 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 NDUFA10O95299 355 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 LARGE1O95461 756 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ASLP04424 464 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ACAP1Q15027 740 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 NFIL3Q16649 462 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 TRIQKQ629K1 86 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 DCLRE1AQ6PJP8 1040 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 TMEM192Q8IY95 271 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 RASGRP4Q8TDF6 673 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 FBXW5Q969U6 566 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 AIF1LQ9BQI0 150 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 NRDE2Q9H7Z3 1164 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 FAM49BQ9NUQ9 324 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 MCM8Q9UJA3 840 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ASF1AQ9Y294 204 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ZNF521Q96K83 1311 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 PITPNM2Q9BZ72 1349 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 PIKFYVEQ9Y2I7 2098 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 SYNGR4O95473 234 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 LBPP18428 481 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 IDSP22304 550 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 PRKAG1P54619 331 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 FKBP1AP62942 108 aaKnown RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 BTKQ06187 659 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 LAPTM5Q13571 262 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 NR6A1Q15406 480 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 LRRC8AQ8IWT6 810 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 USP6NLQ92738 828 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 NXPE3Q969Y0 559 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 HDHD2Q9H0R4 259 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 DCP1AQ9NPI6 582 aaPredicted RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 PCDHGB1Q9Y5G3 927 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 RPS6KL1Q9Y6S9 549 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 NRKQ7Z2Y5 1582 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 PTGES3LE9PB15 166 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 LOC110117498-PIK3R3F6TDL0 507 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ATP6V1B1P15313 513 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 RGS7P49802 495 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 GDI2P50395 445 aaKnown RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 ARFIP1P53367 373 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 SLC20A2Q08357 652 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ITGA7Q13683 1181 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 DOK6Q6PKX4 331 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 KYAT3Q6YP21 454 aaKnown RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 ILDR2Q71H61 639 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 OVCA2Q8WZ82 227 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 PIK3R3Q92569 461 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 THRSPQ92748 146 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 UPF1Q92900 1129 aaKnown RBP eCLIP5.05□□□□□ -1.6
TTC3-204ENST00000399017 RNF25Q96BH1 459 aaPredicted RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 TMCO6Q96DC7 493 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ZNF514Q96K75 400 aaPredicted RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 ZYG11BQ9C0D3 744 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ARHGAP20Q9P2F6 1191 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 VANGL2Q9ULK5 521 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 PCDHGB2Q9Y5G2 931 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.05□□□□□ -1.69e-7■■■□□ 16.9
TTC3-204ENST00000399017 CEP250Q9BV73 2442 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 USP42Q9H9J4 1324 aaKnown RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 CEMIPQ8WUJ3 1361 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 TRIM3O75382 744 aaPredicted RBP5.05□□□□□ -1.6
TTC3-204ENST00000399017 ARP10275 920 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ARFIP2P53365 341 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 CRISP1P54107 249 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 FGL2Q14314 439 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 MLC1Q15049 377 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 ERMARDQ5T6L9 678 aa5.05□□□□□ -1.6
TTC3-204ENST00000399017 KIAA0895LQ68EN5 471 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms