RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ARMCX4Q5H9R4 360 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 NETO2Q8NC67 525 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 RHBDL2Q9NX52 303 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 TBC1D14Q9P2M4 693 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 SMIM28A0A1B0GU29 152 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 GALNT3Q14435 633 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 PFKFB4Q16877 469 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 DDI2Q5TDH0 399 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 DHFR2Q86XF0 187 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 OR52K1Q8NGK4 314 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 RNASE11Q8TAA1 199 aaKnown RBP14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 SLC4A5Q9BY07 1137 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 FAM126AQ9BYI3 521 aaPredicted RBP14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 ARHGAP39Q9C0H5 1083 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 PDZD7Q9H5P4 517 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 TAS2R14Q9NYV8 317 aa14.36□□□□□ -0.11
PCDHA11-201ENST00000398640 C1orf232A0A0U1RR37 186 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 SPATA31C1P0DKV0 1188 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 TMED10P49755 219 aaKnown RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 MAPK10P53779 464 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 PURAQ00577 322 aaKnown RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 ZNHIT3Q15649 155 aaPredicted RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 CDKAL1Q5VV42 579 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 CFAP52Q8N1V2 620 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 SEMA6AQ9H2E6 1030 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 FBXO6Q9NRD1 293 aaPredicted RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 TSC22D4Q9Y3Q8 395 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 A0A0U1RQJ8 604 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 CACNB4O00305 520 aaPredicted RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 TRIM13O60858 407 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 OR4Q2P0C623 313 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 LBPP18428 481 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 INAQ16352 499 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 CNSTQ6PJW8 725 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 PRR23BQ6ZRT6 265 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 TRIB2Q92519 343 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 PROX1Q92786 737 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 MCRS1Q96EZ8 462 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 FUT8Q9BYC5 575 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 PRKAB1Q9Y478 270 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 H0Y858 1186 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 TPP1O14773 563 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 CLK3P49761 638 aaKnown RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 RAD23AP54725 363 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 PAGE2BQ5JRK9 111 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 WNT8BQ93098 351 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 SH3GL2Q99962 352 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 PRRG4Q9BZD6 226 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 NINJ2Q9NZG7 142 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 ARMCX1Q9P291 453 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 ANKRD6Q9Y2G4 727 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 UBOX5O94941 541 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 ADRB2P07550 413 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 CYP3A5P20815 502 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 DGKAP23743 735 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 C12orf50Q8NA57 414 aaPredicted RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 ZYG11BQ9C0D3 744 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 DMGDHQ9UI17 866 aaKnown RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 INVSQ9Y283 1065 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 LYVE1Q9Y5Y7 322 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 SETD1AO15047 1707 aaKnown RBP14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 DLG5Q8TDM6 1919 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 HACD1B0YJ81 288 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 PIRTP0C851 137 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 EPORP19235 508 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 S100A3P33764 101 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 NUP107P57740 925 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 IL2P60568 153 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 RAB14P61106 215 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 ALLCQ8N6M5 410 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 DDHD1Q8NEL9 900 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 APOPT1Q96IL0 206 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 TEPSINQ96N21 525 aa14.35□□□□□ -0.11
PCDHA11-201ENST00000398640 MRASO14807 208 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 PDE5AO76074 875 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 NTRK1P04629 796 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 MAGEA10P43363 369 aaPredicted RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 MRPS35P82673 323 aaKnown RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 DPYSL3Q14195 570 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 PLEKHA7Q6IQ23 1121 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 KREMEN2Q8NCW0 462 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 MRPS26Q9BYN8 205 aaKnown RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 SAGE1Q9NXZ1 904 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 GNPTGQ9UJJ9 305 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 GLI3P10071 1580 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 SCAMP1O15126 338 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 FCGR1AP12314 374 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 FGFR3P22607 806 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 NOS2P35228 1153 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ACSM2AQ08AH3 577 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 TIGD5Q53EQ6 642 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ACSM2BQ68CK6 577 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 IPCEF1Q8WWN9 437 aaPredicted RBP14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ABCG8Q9H221 673 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 GOLGA2P5Q9HBQ8 144 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ETNK2Q9NVF9 386 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 ADAM30Q9UKF2 790 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 NR2E1Q9Y466 385 aa14.34□□□□□ -0.11
PCDHA11-201ENST00000398640 A0A087X1B8 175 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms