RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 SYNE4Q8N205 404 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 SFRP1Q8N474 314 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 CAMKVQ8NCB2 501 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 OR5M3Q8NGP4 307 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 OR14K1Q8NGZ2 314 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 PSMA8Q8TAA3 256 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 TBC1D15Q8TC07 691 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 BRSK1Q8TDC3 778 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 TMEM171Q8WVE6 324 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC13A3Q8WWT9 602 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 CTNNBL1Q8WYA6 563 aaPredicted RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC7A6OSQ96CW6 309 aaPredicted RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 FAM89AQ96GI7 184 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 PRR11Q96HE9 360 aaPredicted RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZBTB45Q96K62 511 aaPredicted RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 FAM111AQ96PZ2 611 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 HAPLN3Q96S86 360 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 INTS14Q96SY0 518 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 GAD1Q99259 594 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 PKP4Q99569 1192 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 SMOQ99835 787 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 SH3GL2Q99962 352 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 UTP14AQ9BVJ6 771 aaKnown RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 NUP85Q9BW27 656 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 NPLQ9BXD5 320 aaPredicted RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 HEMGNQ9BXL5 484 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZNF341Q9BYN7 854 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 TRIM31Q9BZY9 425 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 NYXQ9GZU5 481 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 ENKD1Q9H0I2 346 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 C17orf75Q9HAS0 396 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 MAGEE1Q9HCI5 957 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 MSL2Q9HCI7 577 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC22A11Q9NSA0 550 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 C20orf141Q9NUB4 165 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 PSD3Q9NYI0 1048 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 IL1RAPL1Q9NZN1 696 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 CNIH4Q9P003 139 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 NCDNQ9UBB6 729 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 PEMTQ9UBM1 199 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 ARMCX3Q9UH62 379 aaPredicted RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC12A4Q9UP95 1085 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 CHKBQ9Y259 395 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 PCDHB2Q9Y5E7 798 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 RBM8AQ9Y5S9 174 aaKnown RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 RAD54BQ9Y620 910 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 ATP8B3O60423 1300 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 PNPLA7Q6ZV29 1317 aa3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZNF644Q9H582 1327 aaPredicted RBP3.34□□□□□ -1.87
RPS4XP3-201ENST00000398541 A0A087WV48 116 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 HTR3EA5X5Y0 456 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 FAM90A8PA6NJQ4 464 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 NPIPB13A6NJU9 1138 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 LRRC53A6NM62 1247 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 CCDC169A6NNP5 214 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 NPIPB5A8MRT5 1133 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 KDM4EB2RXH2 506 aaPredicted RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 NPIPB4C9JG80 1138 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 M0QZQ0 153 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 AP3B1O00203 1094 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 CACNB4O00305 520 aaPredicted RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 SLC33A1O00400 549 aaPredicted RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 IFIT3O14879 490 aaKnown RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 SLC25A17O43808 307 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 HS6ST1O60243 411 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 MITFO75030 526 aaPredicted RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 TSC22D2O75157 780 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 AVILO75366 819 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 TACC1O75410 805 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 TPPPO94811 219 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 SEC31AO94979 1220 aaKnown RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 PRSS23O95084 383 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 CSF1RP07333 972 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 GALTP07902 379 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 ZFYP08048 801 aaPredicted RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 CHRM4P08173 479 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 SRPRAP08240 638 aaKnown RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 FAM90A13PP0C7W8 464 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 FAM90A24PP0C7X0 464 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 LYL1P12980 280 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 ARSAP15289 507 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 CD19P15391 556 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 TCEA1P23193 301 aaKnown RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 IL4RP24394 825 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 PON1P27169 355 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 PPIFP30405 207 aaKnown RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 FMO4P31512 558 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 ACVRL1P37023 503 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 SULT1E1P49888 294 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 MTHFSP49914 203 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 SNU13P55769 128 aaKnown RBP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 ARHGAP8P85298 464 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 TAP1Q03518 808 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 HGFACQ04756 655 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 CDK18Q07002 472 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 FOXL1Q12952 345 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 TRA2AQ13595 282 aaKnown RBP eCLIP3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 CBFBQ13951 182 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 UBXN2BQ14CS0 331 aa3.33□□□□□ -1.88
RPS4XP3-201ENST00000398541 RPS6KA1Q15418 735 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms