RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 OXTRP30559 389 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 CASQ1P31415 396 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 ACSL1P33121 698 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 GDF10P55107 478 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 SFSWAPQ12872 951 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 SNX1Q13596 522 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 CCNG2Q16589 344 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 ZC3H14Q6PJT7 736 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 ERN2Q76MJ5 926 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 PRELID2Q8N945 189 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 FAM71DQ8N9W8 422 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 ECHDC3Q96DC8 303 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 IMP4Q96G21 291 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 FERMT1Q9BQL6 677 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 GLOD4Q9HC38 313 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 WSB2Q9NYS7 404 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 DKK3Q9UBP4 350 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 TSPAN11A1L157 253 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 SOCS5O75159 536 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 ZNF189O75820 626 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 ADRB3P13945 408 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 CES1P23141 567 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 CD86P42081 329 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 NEK3P51956 506 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 ADPRHP54922 357 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 TRAF2Q12933 501 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 DRICH1Q6PGQ1 229 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 PID1Q7Z2X4 250 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 ZSWIM9Q86XI8 627 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 CREG2Q8IUH2 290 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 NAP1L3Q99457 506 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 AP1M1Q9BXS5 423 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 BTBD1Q9H0C5 482 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 SLC25A51Q9H1U9 297 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 TRHDEQ9UKU6 1024 aa17.53■□□□□ 0.4
CSNK1D-204ENST00000398519 CFAP69A5D8W1 941 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 SLC7A4O43246 635 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 HTRA2O43464 458 aaPredicted RBP17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 SERPINF2P08697 491 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 NFKB1P19838 968 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 TAS2R38P59533 333 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 SKOR1P84550 965 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 ANKRD20A2Q5SQ80 823 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 ANKRD20A1Q5TYW2 823 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 ANKRD20A3Q5VUR7 823 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 PRPF39Q86UA1 669 aaKnown RBP17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 CCDC110Q8TBZ0 833 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 HCAR2Q8TDS4 363 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 ATOH1Q92858 354 aaPredicted RBP17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 CAPZA3Q96KX2 299 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 SPATA13Q96N96 652 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 RBM15Q96T37 977 aaKnown RBP eCLIP17.52■□□□□ 0.399e-8■■■□□ 17.2
CSNK1D-204ENST00000398519 IRF2BPLQ9H1B7 796 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 SGK2Q9HBY8 427 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 FAM86C1Q9NVL1 165 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 RAPGEFL1Q9UHV5 662 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 RAI2Q9Y5P3 530 aa17.52■□□□□ 0.39
CSNK1D-204ENST00000398519 C5orf60A6NFR6 353 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 PLRG1O43660 514 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 STK10O94804 968 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 SEMA4FO95754 770 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 ITGAVP06756 1048 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 ABL2P42684 1182 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 RPL6Q02878 288 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 LRRC73Q5JTD7 316 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 CFAP58Q5T655 872 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 FBXL19Q6PCT2 694 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 BRAT1Q6PJG6 821 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 SLC36A4Q6YBV0 504 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 OR14C36Q8NHC7 312 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 SPATA22Q8NHS9 363 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 TADA1Q96BN2 335 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 RTP4Q96DX8 246 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 GPR174Q9BXC1 333 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 TDRD1Q9BXT4 1180 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 GBA3Q9H227 469 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 HOMER3Q9NSC5 361 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 ZNF148Q9UQR1 794 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 NUMA1Q14980 2115 aa17.51■□□□□ 0.39
CSNK1D-204ENST00000398519 F5H423 210 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 SPINT1O43278 529 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 MAP3K13O43283 966 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 FZD6O60353 706 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 MT-CYBP00156 380 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 TIMP2P16035 220 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 CCDC15Q0P6D6 951 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 SIM2Q14190 667 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 PLK5Q496M5 336 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 CEP68Q76N32 757 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 TTC7BQ86TV6 843 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 C11orf74Q86VG3 221 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 ZSCAN30Q86W11 494 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 PDCD6IPQ8WUM4 868 aaKnown RBP17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 SPOCK2Q92563 424 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 FCRL5Q96RD9 977 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 GORASP1Q9BQQ3 440 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 DUSP15Q9H1R2 295 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 EPC1Q9H2F5 836 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 RSPH14Q9UHP6 348 aa17.5■□□□□ 0.39
CSNK1D-204ENST00000398519 PCDHB9Q9Y5E1 797 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms